Gene Ddes_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2162 
Symbol 
ID7285878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2605386 
End bp2606489 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content63% 
IMG OID643582984 
Productchaperone protein DnaJ 
Protein accessionYP_002480736 
Protein GI220905424 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID[TIGR02349] chaperone protein DnaJ 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTTG ATTACTACGA GGTGCTGGGC GTCAGCCGCA GCGCCGGTGA AGATGAGATC 
AAAAAGGCCT ACCGCAAGCT TGCCCTCAAA TATCACCCGG ACCACAACCC CGGCGATCAG 
GAGGCTGAAC AAAAATTCAA GCAGGCGGCG GAAGCTTACG AAATCCTGCG TGACGCGGAA 
AAACGCGCCC GCTACGACCG CTTCGGCCAT GCCGGAGTTC AGGGCGGGGC TGGCGGCTTC 
GGCAGCAACG AAGACATCTT CGCCCACTTC AGCGACATTT TCGGCGACCT GTTTGGTTTT 
TCCTCTGCCC GTGGGCCGCG GCCCATGGCC GGATCAGACC TGCGCTACAA TCTCACCATT 
ACTTTTTCCC AGGCCGCACG CGGTGATGAG ATAACCCTCT CCCTGCCCAA GCACGTCACC 
TGTGGCGACT GCAAGGGCAG CGGCGCAGCC CCGGGCAGCA AGGCCGAGAC CTGCCGACAT 
TGCAACGGCT CCGGCCAGGT GCGCCGTTCA CAGGGCTTTT TCCAGATCGC CATGCCCTGC 
CCGTCCTGCG AAGGCACCGG GCGCGTCATC AGCAAGCGTT GCCCCAAATG CAAGGGCGAA 
GGCATCGTTA CCGACACTCG CGAACTGGTC GTGCGCGTGC CTGCAGGGGT TGACACGGGA 
ACACGCCTGC GGGTGCGGGG CGAGGGCGAA CCCGGTGTAC ACGGCGGCCC CCCCGGCGAC 
CTGTATGTGG TTCTCACCGT AGAACAGGAC AAACGCTGGC AGCGGCAAGG CCAGGACCTT 
ATCTTTACCC AGGAGATCAG CTTTGTGCAG GCTGCCCTGG GGCACAGGGT GGAAATTCCG 
GGCCTGGACG GTCCCATGCC CCTGGACATT CCCAAGGGCG TACAAAGTGG CGCGCTGCTG 
CGCATGGCGG GCGAGGGCAT GCCCTACCCC GGCCGCAAGC AGCGCGGCGA CATGCTTGTG 
GAGGTCAAGG TGCTCACACC CACGCGCCTT TCGGCCCGGC AGGAAGAGCT GCTGCGCGAA 
TTTGAAGCCG CAGGGGAGCA GACCCCGCTA CAGAAAGTCA AAAAGGCCGC CAAAAAAATC 
GGCAAGGCCA TGGGCCTGGA CTAG
 
Protein sequence
MELDYYEVLG VSRSAGEDEI KKAYRKLALK YHPDHNPGDQ EAEQKFKQAA EAYEILRDAE 
KRARYDRFGH AGVQGGAGGF GSNEDIFAHF SDIFGDLFGF SSARGPRPMA GSDLRYNLTI 
TFSQAARGDE ITLSLPKHVT CGDCKGSGAA PGSKAETCRH CNGSGQVRRS QGFFQIAMPC 
PSCEGTGRVI SKRCPKCKGE GIVTDTRELV VRVPAGVDTG TRLRVRGEGE PGVHGGPPGD 
LYVVLTVEQD KRWQRQGQDL IFTQEISFVQ AALGHRVEIP GLDGPMPLDI PKGVQSGALL 
RMAGEGMPYP GRKQRGDMLV EVKVLTPTRL SARQEELLRE FEAAGEQTPL QKVKKAAKKI 
GKAMGLD