| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2160 |
|---|
| Symbol | |
|---|
| ID | 7285876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2603874 |
|---|
| End bp | 2604668 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643582982 |
|---|
| Product | PP-loop domain protein |
|---|
| Protein accession | YP_002480734 |
|---|
| Protein GI | 220905422 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.238874 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGAG AAAAACGGTC TTTCGCGCAG GAAGTATGCG TGAAAAGCGC GGGCAAGGCC
ATGCAGATGA CAGGCATGCT CTGGCCCGGC TGCCGAGTGG GAGTGGCGGC CTCCGGCGGG
GTGGACAGCT TTGTATTGCT GAAAACGCTT AAAATACGCC AGGGAATCGT ACCTTTTCGC
TTTGAAATCA TGGCCCTGCA CCTTAATCCC GGCTTTGACG GCCAGAGTCA CGCGGCGCTT
TTGCCCTGGC TGGCGGCGCA CGGCATTCCT GCTCATGTTG AGGTTACAAG CCACGGGCCT
GACGCCCATT CAGAAAAAAA CCTGCGCCGC TCGGCCTGTT TCCGCTGTGC CTGGCTGCGT
CGCAAAAGAC TGTTCGAGCT TTGCTCGCAG TACGGGCTTA CCCATCTTGC CCTGGGACAT
AATGCCGAGG ATCTGGTGGA AACGTTTTTC ATGAACATCT GCCGCAACGG GCGTGTGGAC
GGCATGAGCA TGAACGAGCC TTTTTTTGAC GGCAAGTTAC GGCTTATCCG CCCGCTCATG
CTGGTGGAGA AAAAATACAT ACGTCAGGCG GCGCGGCAAT GGGGCCTGCC CATATGGGCC
AACGCCTGCC CCTCAGCCGG AAAGACAGCC AGAAGCGACA TGGCCCAGAC CCTTGAACAT
CTTTATGCCA TCACAAAAGA CGGCCGTCGC TGTGTGCTCA ACGGCCTGAC CCGCTGGCAG
CTCGATAAAA GCAGCGCGGC CGCGCGTGAG CGCGCGCAGG CAGACATGCG GGAAGGTGTG
CAGGATGACG GCTGA
|
|---|
| Protein sequence | MSREKRSFAQ EVCVKSAGKA MQMTGMLWPG CRVGVAASGG VDSFVLLKTL KIRQGIVPFR
FEIMALHLNP GFDGQSHAAL LPWLAAHGIP AHVEVTSHGP DAHSEKNLRR SACFRCAWLR
RKRLFELCSQ YGLTHLALGH NAEDLVETFF MNICRNGRVD GMSMNEPFFD GKLRLIRPLM
LVEKKYIRQA ARQWGLPIWA NACPSAGKTA RSDMAQTLEH LYAITKDGRR CVLNGLTRWQ
LDKSSAAARE RAQADMREGV QDDG
|
|---|
| |