Gene Ddes_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2140 
Symbol 
ID7285856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2579508 
End bp2580662 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content67% 
IMG OID643582962 
Productcobalamin biosynthesis protein CbiB 
Protein accessionYP_002480714 
Protein GI220905402 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID[TIGR00380] cobalamin biosynthesis protein CobD 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCTGG GTCACGGGTT TTCCCTGGTA TTTCCCTGGT CTGTGTGGGA ATGCTGGTGG 
CTGGCCCCTC TGGCCCTTGT TCTGGATTTG TGGCTTGGCG ATCCTGCTTT GCCCTGGCGG
CATCCTGTCT GCATTGTGGG CAGGTTTCTG GACGCTCTGG AAGGCCCTGC GCGGTGCTTT
ATGGCGACCG GCGCGGCAGA AAAACAGCGT TTGCGCGGCC GCCTTGCCGG GGCGGCGGCC
CTGGCCGTGC TGACGTTCTG TACGGGACTG GCCGCCTGGA GCCTGACATC GCTGCCGTTG
TTGGCCCTGC CGCTGGCGGT ATACCTGGGC TGGTCCGGCC TTGCCATGGG CAGCCTGCTG
CAAACCGGGC GCACTGTGCT GGAACGTGTG GAACATGCGC CCGTGCCTGA AGCCCGTGAG
GCACTCTCCT GGCTCGTCAG TCGCGAGACC GGCAGCATGG ATCGACCGCT CATGCGCAAG
ACGCTGGCCG ATACCCTTTC TGAAAATCTC ACAGACGCTT TTACCGCGCC TTTTTTCTGG
CTGCTGGTTG GCGGCCCTGT AGCCCTGTGG TGCTATAAGG CCGTCAGCAC CACGGATTCC
ATGTGGGGCT ACACCACTGA CAAGTGGCGC TGGCTCGGCT GGGCCGGAGC GCGGGCTGAC
GACGCCCTGG CCTTTATTCC GGCCCGCCTG GCTGCGCTGA GTACGGCGCT GGCCCATGTG
CTGGCCTGTC TGTGCGCGCG GCTTGCCGGC GCTTTCGGCC GCCGGTGCGT GCGGGTAGCG
GCCCGCCAGC CTTTGCAGCG CCTCATCCGT TGCGCGGCCA GGCTTCCGGC ATGGCCGGGG
CGCTGGCCCG GCCTTGGCGT GGTGGCCCGT CAGGCCGTGG GCATGCCCAG TCCCAATTCC
GGCTGGTCCA TGACGGCCTG CGCCTGGCTG TGCTGGGCGC GCATGGCAGG GCCGTCGGTC
TATTTTGGAG TGCTGACGCC CAAGCCCTGG CTTGGACCGT CGCCAGAGGA TGAGGAACGT
CGCGGCCTTT CGGCAGCATG GGATGTTTCC CGCCTGTCGG CCCTGTGCTC CCTGCTGTGG
TGGAGCGCCC TGTGTGGTGG CCTGGCCCTC TGGCTTACGG CTCTTTTGCT GCTTTCTGGC
ACAGTGTGGG CGTGA
 
Protein sequence
MSLGHGFSLV FPWSVWECWW LAPLALVLDL WLGDPALPWR HPVCIVGRFL DALEGPARCF 
MATGAAEKQR LRGRLAGAAA LAVLTFCTGL AAWSLTSLPL LALPLAVYLG WSGLAMGSLL
QTGRTVLERV EHAPVPEARE ALSWLVSRET GSMDRPLMRK TLADTLSENL TDAFTAPFFW
LLVGGPVALW CYKAVSTTDS MWGYTTDKWR WLGWAGARAD DALAFIPARL AALSTALAHV
LACLCARLAG AFGRRCVRVA ARQPLQRLIR CAARLPAWPG RWPGLGVVAR QAVGMPSPNS
GWSMTACAWL CWARMAGPSV YFGVLTPKPW LGPSPEDEER RGLSAAWDVS RLSALCSLLW
WSALCGGLAL WLTALLLLSG TVWA