| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2079 |
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| Symbol | |
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| ID | 7285795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 2502079 |
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| End bp | 2503158 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643582901 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002480653 |
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| Protein GI | 220905341 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.929188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCC ATAAAACCCT TGCCATCCTT GCCGGTTGCC TTGGCAGTAC ATTGCTGCTC
CTGGGCTTGC TGGCGGGTTT TGTGCCGCAG CATGAAGGGT ATGAGGTGCG CCGCCGCGCA
AGCCCTGTTG TGGTCAGCCT GCGGCCCGAA GACATGCCTG TTCCCATCGT TCCGCAGGGC
GACGGTTCGC GCCAGTGGTC CTTGCGCCGC GCGGCATCGC CCGTGGTGGC GCCGGTGTCT
TTGGCCGATG CTTCGTCACG GGCTGAGACA GAGGACGGCG ACGGTTTTTT CAGCCAGGTT
CCGGCAGGCA CGGGGCAGTT GGCTTCTCTG CTGGCGCTTG ATGGATTTTC CATGCCGCCG
CTGCTGGCTG TACAGCCCTC GCGCTTCGGG GACGCTGTTG ACGCCAGGGG GCTGCCCCTG
CGCTGGCTGG CTGCCGAAAC ATTGCTTGAG GGCTACAGCC CCCTGCCGCC GCGTACCGGC
AAGACCGCCG GGCAGGGCGG TACAAGGGGT ATGTCTGCGG CCAATGCCTT TTACGGTAAC
GATATGCTCC CGCCCAGGGC GCGGCGCTAC CAGCAGATAG TGGAAAGCTT TGCCGGGCGC
TATAATCTGA GCACCGAACT TGTGTACGCC ATTATCCACA GCGAAAGCTC GTTTTCCCCC
ACCCTTGTGA GCCACAAGTC GGCCATGGGC CTGATGCAGA TTTTGCCGGA CACGGCCGGG
GGCGAGGTGC ACCGTTATCT GTACGGGCGC ACGGGCGACG TAAGCTTTGA AGACCTGCGC
GTGCCGGAAA CAAATATCCG CTACGGTACG ACCTATCTGC ACATTCTGCT CACGCGGTAT
TTCGCCGGGG TGCACGACCC GAGGGCGCGT GAATACTGTG CCGTAGCCGC ATACAATATG
GGGCCGAACC GCTTTTTGCG GCTTTTCGGC AACAGTCCGG AAGAAGCTGT TGACGCCATT
AACGCCCTGA CAGCAGAACA GTTGTACGAA GACCTGACCA TCCGCCTGCC CGTGGCCGAA
ACCCGCGCCT ATGTCGCCAA GGTCGCCAGG ATGAAAGGGC ATTACGCCGC GCTGCAATAA
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| Protein sequence | MKRHKTLAIL AGCLGSTLLL LGLLAGFVPQ HEGYEVRRRA SPVVVSLRPE DMPVPIVPQG
DGSRQWSLRR AASPVVAPVS LADASSRAET EDGDGFFSQV PAGTGQLASL LALDGFSMPP
LLAVQPSRFG DAVDARGLPL RWLAAETLLE GYSPLPPRTG KTAGQGGTRG MSAANAFYGN
DMLPPRARRY QQIVESFAGR YNLSTELVYA IIHSESSFSP TLVSHKSAMG LMQILPDTAG
GEVHRYLYGR TGDVSFEDLR VPETNIRYGT TYLHILLTRY FAGVHDPRAR EYCAVAAYNM
GPNRFLRLFG NSPEEAVDAI NALTAEQLYE DLTIRLPVAE TRAYVAKVAR MKGHYAALQ
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