| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1996 |
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| Symbol | |
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| ID | 7285712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 2404074 |
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| End bp | 2409083 |
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| Gene Length | 5010 bp |
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| Protein Length | 1669 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643582818 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_002480570 |
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| Protein GI | 220905258 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.357801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTGT CCAAAAACGC GGTTGGTAAC CTGATTAACA GGTATAAGGC GGTATTGGGG
AAATGCCGCC TGATCAACAC CTTCGGCTCG CTGGCACTGG CAGCGGCCCT GACCCTGGGC
AGCACCGGGC TGGCTATGGC GGCAGACTGG GATGGAGGCA ACCTGACCGT AGGCTCCGGC
GGGGACCAGA CAAGCCTTGC AGTGAATTCT GACGCGGTAG CACTTACAGG AACCCTGACC
ATCACTGACG GCGGCACGGT CACCGTGAAC ATCCCCGGGA GCATTTCGGC CGGAGATGGC
GCTACCCCTT CCAACGGCAA ACTGCTGGTA ACGGGCGGCA CTTTGAACGT CAACGGCTAT
TCGGATTCCC GCGACCTGCA GATCACGGGC GGAACCGTCA ACATCAACGG CACAAACGGT
AACGGCTGGC GCGAAAACGG CCTTGGCGGC TATGCTGAAA CGACCGATGA AAACGATGCC
GCCATTTCTA CCGGCCTGCC CACCCTTGTT TCCGGCCCCA ATACGGTGGT CAACATCACC
TCGGCCAATC TTTTTGGAGG CGCGGCAGCT GACTTTGCGA CAGCTCAACT GAAAATTGCC
GACGGCGCGA CCGTCAACCT TATGGGCCTG TCCCCGGACG AAAACCATAC AAAAGATTTT
GATGATGCAG GAATGCTTTT TACCGGCAAG GGTGCGGCCT CTCTTGACAA AGACAGCGCC
AACCTGCTGA TCACCGGCGA CAGCACCAGA ATCAACGTTG CTCAGGGCAA TCACGGTGTA
TTCAATGCCG GCGTTACCCA CATCACAGAC GGCGCAACCG TTGATGTGCA AGGCGGTCTT
CTGCTGACAG GCTTTCTTAA CACGCCCCCA TCTGAACCGG GCAAAACTGT CACCGGCGCC
ATGCCTGGCG CTCTGGATGG ATACACCAGG GTTACTGATG GAGGAAGCAT TCTTGTTGGA
AACAAGGGGC ATCTTTTCCT GAACAAGGGC ATGACCCTGG ATGTGGCTGC CGATGGCGTG
CTGGACAACG GCGGCAAGGT CAACCTTTAT GCTGACTCTA CGCTTGCCTA CAGCGCTGGC
GGCGACCACA AGCTGACGGG CATTGTAGCC AACGCAGGCA CGCTTTCGGT GACTGACGCC
CATCTTGACC TGACCGGAGC CGAGCTTGAA AAATTCAGCG GCACTGCCGG AGCCATCGCT
GTCGGGCGTG TTCAGGATGC TACTAGCAAC CAGATGGCCC GTGCGGACAT GACTGACGCC
CAGCTTGCCG GCTGGCTTGA AAAAGACGGG TCCGTAACCG TCCAAGGTAC CGCTGCGCGG
CACGCCCGCC TGCATCTGGG CGAAAATGCC ACTGTGGATG CCGCAAGCAT TACCGGCGGC
TCCGCGGCCG TAACCGGCAA GGTCACTCTT TTGGGCGAAG GCAGCATTCA GGCGCAAAAC
ATAAAGCTGA CCGGCGATGC ACTCGCCATT GACAGCACCG GGTCCCAGGG TAACCGCATC
AAGGCCAACA GCCTTGCCCT TACGCCGGAT ACTCCGGATG CGGACTTTAC GCTTGCGTCC
GGCGAGCTTT TTCTCAAGGG CGAGGCAGGC TCCGCGCTCG GCTTCGCGGG CAGCGAAGGC
AAGGGTCTGC AAATAGCCGA CAAGGGCATA CTGAAGCTTG GCGAGGATGC AAATCCCGGC
GGCGACATCA ATGCCAACGT TACGAGCGAG GGCGTAGTTG ACGTTGCCCA GGGCAAGTGG
ACGCTGGCCG CAGGCAAGAC GCTGGATATC CAGGATGGCA GCCTCACCGT TGGCGGCGGA
CACGATGGGC GCTCTGCCGA ACTGAACATC CAGGGCGACC TGAAGAGCAG CGCAGAGGGT
GATGTCGGCC ACGACAACGG CGTCAACGTC ATGAATAACG GCGTATTGTC AGGCGATGCC
GAAAAATTTG TCACATACAC AGACGACGTT GCTGCCATCG CAGCGGGCCT CGAAAAAATA
CATGTGGCCA ATGGCGGTAC GCTGCGGCTT GACGGGCTGG AAAGCGTCAA TACCCAGCAG
ATGCAGAGCA CAAAAACCGG CCTGCTGACT GCGGGCAGCA GCGGCCTTAT CAGCTATGGC
GCCGCCGCCA TAGAAATATC AGACGCCGAC AAGGGAACCA GCGACGGTAG CATCACAGGT
GCCGCGGCAG AAGCCACCAG CGCAGTGCTG GCCGGTATAA ATGCGGAATA TGCCAGCACA
GGCGACGCCA TCACCGTGGG CGGCGGCTTC GGCGTTGATG CTCTTGTCGT TACGGGCAAC
ACCGGCGATG TCGCTGCCGC CATCAACGGC AACCTTACCC TGCTTGGCAA TGGCGGCCAG
TTGATCATCG CTGAAGGCGA TGCGACCACC AATGTCAGCA TCGCTGCCGG AAAAAACCTC
AACCTTGGCT CCACGGGCGC GCCATCCAAC GGCGGCACAC TTAACGGCAA CGTGGAGCTG
GCCGGAGCTG GCTCTGCCCT TAATGTCGCT GCCGCAGACT ATACTGTGGG CGACATCACT
GCTGGCGCTG CCGATACCGG CAATGTGAAC GTCAGTGCTG GCGGGGGCCT TACTGCCGGG
GCTATCGGCA CTGCCACCGA GGCGGTCAGC AGCGTTAGCG CCGACAAGGG CGCTCTTGCG
GCAACGTCCA TTGATGCGGG AAACGTAACC GCGGATAACG GCGGCACGAT ATTGTCCACG
GGCAACATCA CTGCCGGCGG CGTGAACGTG AATAACGGCA GCACTGTCGC TTCTGCTAAG
ACCCTTAATA CCAGCACGGT ACTTGTTACC GATGGCAGCA TCGAGGCCAA GACGCTTACG
GCCTCCGCAG ATGTGACGGT TGCCAACGGC AAACTGCTTG CCACCGGCAC CGTTACTGAC
GCCAGTACGG TGGCAGGCAA CCTTACCCTG ACCGACAGCG AAGCCGCTCT CGGCGACATG
GCTGTAACCG GCACTGCCGC CATTACCGGC AGCAACATTG TGGCCCAGAG CCTTGCAGTG
GATGGCGCAG TCAACGTCAC CGGCGGCAGC CTTGTGGCTG AAAGCCTTGC TGTGGCCGCT
GACGCCGCCT TCATTGACGG CGCGCAGGTC AAGGCCGACA AGCTGACCGG AGCATCGGGC
AAAACCATTG CTGTCGGCGA CGCCGATGAT ACAAAGGGCG GCACGACCCT CACCGTGGGC
AGCCTGAATC TGGCCGGCGG CAATCTCTAT GTGGACCCTG CCTGGGGCCT GGCCTCAAGC
AACGTGGCTG TAGGCGGCTT TACGGGCGCA ACAGCCGCTG ATGTCGAAAT CAACGGCAAC
GTGGGCGTGG GCATGAACTC TATGGCTGCC ATCGGCACCA CCAACATGGG CTGGCTTGCC
GGACAGGTAC AGGAGGCCAC CAACGGCGCG GGCCTGACAG AAAACGGCGT GGACTCCGCC
CTGGGCATCT ACAGTGCCCA GGTGCTTGAC GGCGCTCACG GCATTATTGT GGACGGCACA
AAAACAACCG CGGACTTTAC CGCCACCCCG CCGGCCGCCA ATCATCTTGA TTTCTCCGGC
AAGTCCCTTC TGGTGGTTAC CGCTGCCGCC GCCGTCACCC CTGACGGAGC CATCAGCAGC
AACACCGCAG GCGGCACAGC CAATATCGGC GATGGCGCAA AACTGCGTAT TACTGATGCC
AAAGTGGGTC AGGACTATAC TGTGCTCGGC ACCAATATAG ACACAATCAC CCTTGGCACT
GACGGAACAG GCTGGACAGG TTCCAACTTC ATCACTGACT CGCGCATGAT CAACGGTTCG
TTTGATGCCG CCACCGGCGT GCTGAGCACG GGGCTCAATT CTGCCGCCAA CGTTTACCCC
AAGCTTGACG GCGACCTTGT AAAGGTGCTG GACAATGCCT ACACCGCCGA CCATGTCGGT
CCCGCACATG TGGACTCCGA CGTGAAGGGC GTGCGCTTCC TGTCCCGTGC CACCAGCGAC
AACTTCATCG GCAATGATGC CAATCTGGCC GCCAAAACCA TTGAAAGCGC CGCCCGCATA
GCCGTAGCCG GGGCAGTACC GCAAATGACA ATGGCCGCCA ACAATGCGGC GGGCGCTGCC
ATTACCCAGC GCACCAGCAT AGCCCAGCCT GACGGCAACG GCATGCAGTC CGTTTCGCTC
AACAAGGCGG AAGGCGCGGC CAAAAACGGC ATGGCCCTGT GGATCATGCC CCTGTACCAG
AACCAGAATG CCTGGAGTAT GGAAGCCGGC GACAGCTACG ACCTCAAGTG GCACGGTGGT
CTTGGCGGTG TGGCCCTTGG CGGCGACTAT ACCTTTGATA ACGCCCTGCG CGCGGGCATA
GCCTTCAATA TCGGCGGGGG TTACGCCGAA GGCGAAGGCG ATCTGGCAAA AACCACCAAC
AGCTTCAGCT TCTGGGGCCT TGGGGCGTAC GCCGGATGGG CGAAGGAAAA CTTCGGCCTC
ACTGCCGACG TCAACTACAC CAGCACCTAT AACAAGGTGA AGCAGGAACT GCCCGGAGCC
ATGCAGATGC GCGACCTCAA GAGCGACATC ACGGCATACG CCCTGAGCAC CGGCCTGCGT
GCCGAATACA AGCTCAATAC CCAGTATGTG GACATCATCC CCCACCTGGG CGTGCGCTAC
ATGTACGTGA GCACCGACTC CTACGACGTG AAGAGCAACG GCACCGTCAT GCGCGGAGAT
GAAATGAACC AGAATATCTG GACATTCCCC ATCGGCGTGA CCTTCAGCAA GCAGGTTGAA
ACCGGCAACG GCTGGTACGT GAAGCCCAAC CTTGACCTCG GCATCATTCC CGCCACCGGC
GATATTGAAG CCAGGAGCAA GATCCGCTTT ACCGGAACCG GCACCAAGGC CGAGCTGGAC
ACCCATACAA TGGATTACAT GAGCTATACG GGCGGCCTTG GTCTTGACTT CGGCAATGAC
AACCTGAGCC TTGGCGTGAA CTACAACATA CAGGCCTCTG AGCACAGCAC CTCGCACGGC
GTGTTCGGCA CTGTCCGCTA CGAGTTCTAG
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| Protein sequence | MILSKNAVGN LINRYKAVLG KCRLINTFGS LALAAALTLG STGLAMAADW DGGNLTVGSG
GDQTSLAVNS DAVALTGTLT ITDGGTVTVN IPGSISAGDG ATPSNGKLLV TGGTLNVNGY
SDSRDLQITG GTVNINGTNG NGWRENGLGG YAETTDENDA AISTGLPTLV SGPNTVVNIT
SANLFGGAAA DFATAQLKIA DGATVNLMGL SPDENHTKDF DDAGMLFTGK GAASLDKDSA
NLLITGDSTR INVAQGNHGV FNAGVTHITD GATVDVQGGL LLTGFLNTPP SEPGKTVTGA
MPGALDGYTR VTDGGSILVG NKGHLFLNKG MTLDVAADGV LDNGGKVNLY ADSTLAYSAG
GDHKLTGIVA NAGTLSVTDA HLDLTGAELE KFSGTAGAIA VGRVQDATSN QMARADMTDA
QLAGWLEKDG SVTVQGTAAR HARLHLGENA TVDAASITGG SAAVTGKVTL LGEGSIQAQN
IKLTGDALAI DSTGSQGNRI KANSLALTPD TPDADFTLAS GELFLKGEAG SALGFAGSEG
KGLQIADKGI LKLGEDANPG GDINANVTSE GVVDVAQGKW TLAAGKTLDI QDGSLTVGGG
HDGRSAELNI QGDLKSSAEG DVGHDNGVNV MNNGVLSGDA EKFVTYTDDV AAIAAGLEKI
HVANGGTLRL DGLESVNTQQ MQSTKTGLLT AGSSGLISYG AAAIEISDAD KGTSDGSITG
AAAEATSAVL AGINAEYAST GDAITVGGGF GVDALVVTGN TGDVAAAING NLTLLGNGGQ
LIIAEGDATT NVSIAAGKNL NLGSTGAPSN GGTLNGNVEL AGAGSALNVA AADYTVGDIT
AGAADTGNVN VSAGGGLTAG AIGTATEAVS SVSADKGALA ATSIDAGNVT ADNGGTILST
GNITAGGVNV NNGSTVASAK TLNTSTVLVT DGSIEAKTLT ASADVTVANG KLLATGTVTD
ASTVAGNLTL TDSEAALGDM AVTGTAAITG SNIVAQSLAV DGAVNVTGGS LVAESLAVAA
DAAFIDGAQV KADKLTGASG KTIAVGDADD TKGGTTLTVG SLNLAGGNLY VDPAWGLASS
NVAVGGFTGA TAADVEINGN VGVGMNSMAA IGTTNMGWLA GQVQEATNGA GLTENGVDSA
LGIYSAQVLD GAHGIIVDGT KTTADFTATP PAANHLDFSG KSLLVVTAAA AVTPDGAISS
NTAGGTANIG DGAKLRITDA KVGQDYTVLG TNIDTITLGT DGTGWTGSNF ITDSRMINGS
FDAATGVLST GLNSAANVYP KLDGDLVKVL DNAYTADHVG PAHVDSDVKG VRFLSRATSD
NFIGNDANLA AKTIESAARI AVAGAVPQMT MAANNAAGAA ITQRTSIAQP DGNGMQSVSL
NKAEGAAKNG MALWIMPLYQ NQNAWSMEAG DSYDLKWHGG LGGVALGGDY TFDNALRAGI
AFNIGGGYAE GEGDLAKTTN SFSFWGLGAY AGWAKENFGL TADVNYTSTY NKVKQELPGA
MQMRDLKSDI TAYALSTGLR AEYKLNTQYV DIIPHLGVRY MYVSTDSYDV KSNGTVMRGD
EMNQNIWTFP IGVTFSKQVE TGNGWYVKPN LDLGIIPATG DIEARSKIRF TGTGTKAELD
THTMDYMSYT GGLGLDFGND NLSLGVNYNI QASEHSTSHG VFGTVRYEF
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