| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1978 |
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| Symbol | |
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| ID | 7285694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 2380479 |
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| End bp | 2381948 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643582800 |
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| Product | cobalamin (vitamin B12) biosynthesis CbiD protein |
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| Protein accession | YP_002480552 |
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| Protein GI | 220905240 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
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| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCAA AGCTGCGCGA AGGATTCACC ACCGGCTCGG CAGCCACGGG CGCAGCCCTG
GCCGCCCTGC ACCTGCTGCG CTCCGGCTCT GCACCCGACC ATGTGGATGT GCCGCTGCCG
CCCTTTGCTG CACAGTCGGC TCCCGAATGT CCGGGCAGCC CCGTAGCGGA CGCGGAGGCA
GAACAGGTTT CCAGCCACCG CGCAGACACG GGCGCCTACC AGCATGCCGG GCAGGCAGCC
CAAAAGAAGA CCTTGGAACA TCCGGCCCCG GCGGAGCATG ATGCACAGAA GCCCGGCAGC
GCCACGCAAG ACCTGCGTCC CAGAGGCTGG CTGCGTCTTG CGGTGGCGGC CTGTGCCCCC
GGCCCGGCCC CCGAACTGGC CGCGTTTGCC GGATTTTCCG CCGGACTGCC GCCGGATGCT
GACAAAGTAG ATGCCGTCGG ATCAGGTACA GCCCGCGCCC CGCTGCGGCT GGCACACGCC
TCTATCCGCA AAGACGGCGG CGATGACCCG GATGCCACAT CTGGAGCACT CGTTACGGCC
ACTGTAATTA TGGAAGGCCC CTGGCAGACG GACAGCCTTG CACCCGATCC CGGCGGAATG
GCGCACGATT CAACATGCCC GGCCCAGGAG CCATCTGCCG ACCCCGTCCC GATGCCTCTG
AGCACGGGAT TGCGTATTAC TATTGAAGGC GGTCCGGGGG TGGGGCGCAT AACTCTGCCC
GGCCTGCCAG TACCCGTGGG TGAAGCGGCC ATCAATCCCG TGCCTCGCCA GCAGATCGCC
TTTGCCCTGC GTCATGCTGT TGCGTCCGCT TGGTCCCCAT GCCCGCCCTT GCGCGTGATT
ATCAGCGTTC CCGAAGGCGA ACGACTGGCC CGGCAGACAT TCAACCCACG GCTGGGCATT
GTAGGCGGCA TTTCCATTCT GGGTACGCAG GGCACTGTGC GCCCGTACAG CCACAAAGCC
TGGAAAGCCA CCATCGAGCA GGGCCTGGCC GTGGCTGCGG CCACAGGCTG CCGGTCCATT
GCCCTGACCA CGGGCAGACG CTCCGAACGC CTGCTCATGG AGCGCTACCC CCACATGCCG
CAACAGTGCT TCATACAGGT AGCTGACTTT GCAGCTTTTT CCTTGCAGGC CGCCGGAGCC
GGAAATTTTG ACAATCTTGT GTGGGGCTGT TTTTTCGGCA AGCTGGTCAA GCTGGCCCAG
GGGCATGCCT ACACCCACGC CCGCCACGCG GATCTGGACA TGGCGGGCCT TGCCCGCGTA
TGTGAACAGT ACGGCGCACA CTGCGCGGGG CAGGTAAAAA ACTGCGTCAC CGCCGCCCAC
GCCCTGGAGC TGCTTTTGCA GGACAGGGCC GGATCAGACG TTATACGGCA GGTGGCCGCC
AAAGCCGCTG CAGTGGCGGC AAAATTTGCG GGACACCCCG TGCGGCTGCA CCTTTTTCAC
ACCGACGGCA GGGAATTACT GGCATTATGA
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| Protein sequence | MAAKLREGFT TGSAATGAAL AALHLLRSGS APDHVDVPLP PFAAQSAPEC PGSPVADAEA
EQVSSHRADT GAYQHAGQAA QKKTLEHPAP AEHDAQKPGS ATQDLRPRGW LRLAVAACAP
GPAPELAAFA GFSAGLPPDA DKVDAVGSGT ARAPLRLAHA SIRKDGGDDP DATSGALVTA
TVIMEGPWQT DSLAPDPGGM AHDSTCPAQE PSADPVPMPL STGLRITIEG GPGVGRITLP
GLPVPVGEAA INPVPRQQIA FALRHAVASA WSPCPPLRVI ISVPEGERLA RQTFNPRLGI
VGGISILGTQ GTVRPYSHKA WKATIEQGLA VAAATGCRSI ALTTGRRSER LLMERYPHMP
QQCFIQVADF AAFSLQAAGA GNFDNLVWGC FFGKLVKLAQ GHAYTHARHA DLDMAGLARV
CEQYGAHCAG QVKNCVTAAH ALELLLQDRA GSDVIRQVAA KAAAVAAKFA GHPVRLHLFH
TDGRELLAL
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