Gene Ddes_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1973 
SymbolaroK 
ID7285689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2376567 
End bp2377145 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content60% 
IMG OID643582795 
Productshikimate kinase 
Protein accessionYP_002480547 
Protein GI220905235 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0334894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCGC CCTCCCCTGC CGACGCCCCG CCTGCCATGT CTGGCCCAAC CAGGCCATCT 
CCCTGCATAA TCCTCATCGG CATGGCCGGA GCGGGCAAAT CCACCGTGGG CGAAGCACTG 
GCCCGCACGC TTGGCTGGGC CTTTATGGAC AGCGATCATC TTATTGAAGC CGTGTATGCC 
GCCCGCCTGC AAGATGTTAC CGATGCGCTC GGCAAGTCTG CGTTTCTGGA TGTGGAGTCC 
AGCGTTGTCA GCGCCATAAA GGCCAATCGC ACGGTTATTG CCACAGGCGG CAGTGTTGTT 
TACCGCGAGC AGACCATGCG ACACCTGGCC TCACTGGGAC CGCTGGTTTA CCTGGATGTG 
CCTTTTACCG TGGTGGAAGA ACGTATTGCC CGGAATCCGC AACGCGGCCT TGCCATTGCC 
CCCGGCCAGA CCCTGCGCGA CATTTTTCAG GAGCGGGAAG AGCTTTACAC CCGCTACGCC 
ACATTGCGCT GTCCCGCTGC AGACAAAAAT CCACAACAGT GTGTGAACTG GATAGTGCAG 
CAACTGCCCG CTGAAGTGAC CATGCCTGAC AGGCCGTAA
 
Protein sequence
MPAPSPADAP PAMSGPTRPS PCIILIGMAG AGKSTVGEAL ARTLGWAFMD SDHLIEAVYA 
ARLQDVTDAL GKSAFLDVES SVVSAIKANR TVIATGGSVV YREQTMRHLA SLGPLVYLDV 
PFTVVEERIA RNPQRGLAIA PGQTLRDIFQ EREELYTRYA TLRCPAADKN PQQCVNWIVQ 
QLPAEVTMPD RP