Gene Ddes_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1949 
Symbol 
ID7285665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp2349528 
End bp2350583 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content62% 
IMG OID643582771 
Productbifunctional methionine sulfoxide reductase B/A protein 
Protein accessionYP_002480523 
Protein GI220905211 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00200432 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC GTGTCTTTTT TCTGATTCTG ACCGCATGGC TGCTCTGCGG CGCTTTTGTC 
CCGGCCGCAG CGGATTGCGC CGCTGCCGGG CCAGTTGATG CAGCTTTACC GGAGACTGCC 
ATGAAACCAT CTTTTCCCAT GCCGCCCCTT TCCGGGCCGG AAGCGGACAT TATTTTGCGT 
AAAGCCACGG AAGCCCCGTA TTCCGGGCAA TATACCAACA AACGCGAAGC CGGGACCTAT 
GTGTGCCGCC AGTGCGGCAC GCCTCTTTAC AGCTCGCGCG ACAAGTTTGA ATCCGGCTGC 
GGCTGGCCCA GCTTTGACGA CGAACTGCCC GGTGCGGTGC GCCGCCAGCC CGATGCGGAC 
GGCAGAAGGG TGGAAATTGT CTGTGCAAAC TGCGGCGGGC ATCTGGGGCA TGTTTTTGCG 
GGCGAGGGTT TCACCGCCAA GAATACCCGG CATTGCGTCA ACTCGCTGTC CATGTCCTTT 
TATCCGGCAG GCAGCCCGGA AGAGGCGCAG GCGCTGGCCC GGTCCTCCCC GCAGGGTTGT 
ACGGCCACCG CCATCGTGGC CGGAGGATGT TTTTGGGGAG TGGAAGATGC TTTCAGAAAG 
ATGCCGGGCG TATGCGCCGC TGTTTCCGGC TATACCGGAG GCCGTACGCC GGACCCGACC 
TATGAGGCCG TGTGCGGCGG CAATACCGGA CACGCCGAGG CAGTGCGCGT GAGCTTTGAC 
CCGTCTGTGG TCAGCTACGA GCAGATTTTG CGCCGTTTTT TTGAAATCCA CGATCCCACG 
CAGCTTGATC GCCAGGGACC GGACGTGGGC GATCAGTACC GCTCGGCTGT ATTTTTTCTT 
GATGCGGAGC AGGAAGCCGT GGCGCGCAGC CTTATGAGCC GCCTGCGCGA ACTGGGATAC 
GATGTGGTGA CACGGCTTGA ACCGGCCGGG CCGTTTTACA TGGCCGAAGA GTATCATCAG 
CGTTTTGCAG AACGCACGGG GCGGGGACGC TGCCACATGC CCGTACCGCG CTTTGACATA 
CCCGCCGGGG GCGGCGGTGG CGCGTTGCGG AAGTGA
 
Protein sequence
MSQRVFFLIL TAWLLCGAFV PAAADCAAAG PVDAALPETA MKPSFPMPPL SGPEADIILR 
KATEAPYSGQ YTNKREAGTY VCRQCGTPLY SSRDKFESGC GWPSFDDELP GAVRRQPDAD 
GRRVEIVCAN CGGHLGHVFA GEGFTAKNTR HCVNSLSMSF YPAGSPEEAQ ALARSSPQGC 
TATAIVAGGC FWGVEDAFRK MPGVCAAVSG YTGGRTPDPT YEAVCGGNTG HAEAVRVSFD 
PSVVSYEQIL RRFFEIHDPT QLDRQGPDVG DQYRSAVFFL DAEQEAVARS LMSRLRELGY 
DVVTRLEPAG PFYMAEEYHQ RFAERTGRGR CHMPVPRFDI PAGGGGGALR K