Gene Ddes_1886 details

Gene Information

• Locus tag: Ddes_1886
• ID: 7285601
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
• Kingdom: Bacteria
• Replicon accession: NC_011883
• Strand: +
• Start bp: 2274681
• End bp: 2275064
• Gene Length: 384 bp
• Protein Length: 127 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643582707
• Product: hydrogenase expression/synthesis HypA
• Protein accession: YP_002480460
• Protein GI: 220905148
• COG category: [R] General function prediction only
• COG ID: [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
• TIGRFAM ID: [TIGR00100] hydrogenase nickel insertion protein HypA

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.552907
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATGAAG CGAGTCTGGT TCAGGGCCTT CTGGACATCT GCCTGAAGTC TCTGAAAGAT 
CACAACGAGG CGCACCCTGA AAACCAGGTA GAGCGCATAC ACAAGGTGGA ATGCCAGCTT 
GGCCTTATCG CCTGCGTGGA GGCGCAAACC CTTACCGCCT GCTTTGAGCT TTTTGCGGAA 
GGAACCCCGG CCGAAGGAGC GCAATTGCTT TTGCATACAG CGCCCCTGCC CTGCCGCTGT 
ACTGATTGCA GCCATGAATT CAGCCTGACG CAACGGCATT TCGTCTGTCC CAGTTGCGGC 
GGCGAGAACA TCCACTTCAA CGGGGGCCAC GGACTTACCC TGATGGCCCT GCACGTTGCA 
TCCGAGGAAA CGGACCATGA CTGA 

 

Protein sequence

MHEASLVQGL LDICLKSLKD HNEAHPENQV ERIHKVECQL GLIACVEAQT LTACFELFAE 
GTPAEGAQLL LHTAPLPCRC TDCSHEFSLT QRHFVCPSCG GENIHFNGGH GLTLMALHVA 
SEETDHD