Gene Ddes_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1714 
Symbol 
ID7285425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp2073147 
End bp2074079 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content60% 
IMG OID643582533 
ProductYbbR family protein 
Protein accessionYP_002480290 
Protein GI220904978 
COG category[S] Function unknown 
COG ID[COG4856] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCCT CTGATATTCC CCGGCGTGCG CCACATCTGG CGTCCCTGCT GGTGGCCGTG 
CTTGCGGCCG TGAGCATGTG GTATGTGGTC AGCGTGCGCG AGCGCCTTGA AGCCCAGTTG 
GAAGTCACCC TTGACTACTA CGGCATACCC GCAAACCTGG TGATCACCGA TGGCCTTATC 
AACAAGGCCG TGGTGCGCCT GCGCGGGCCG GAAACCCTTT TGCGCTCGGT TACCCAGAGC 
AAGCTTATCC AGGCGGTCAA TCTTTCCCAT ATCAAAAAAG GTGTTACAAT GGTGCCCCTT 
ACGGCCGAAC ATCTCGGCCC GGGGTTTCGC GCCTTTGAGC TTATTGACGT GCAGCCACCG 
CGCATCGCCA TTACTGCTGA TACTCTGGTG GAACGGGCGG TTCCCGTGCG GCTCACCGTG 
GATTCGCCCC TGCGCAACGG GGCGCTGACT GTGGAGAATG CCAGGGTGGA CCCTGCCACG 
GTTACCCTGC GCGGACCGGA AAGCGTGGTG GAAGAAATCT CTCACGTGCC GGTTACCATC 
ATGGCCGACC CCACGGCAGC GGGAAGCACT GTGCATCAGG TCATAACCCT GGATACGCCG 
AGTCTGGTGA CCGCGATTCC TCCTACAGTC AAGGTGCAGT ACAGCATTAC CAGCGGGCGC 
ACTACGGTGA GCCAGCGCTG CAAGGTGGAA ATTTCTGCCG AAAACCGCCG CCTCTACAAA 
GTGGAGCCGG AAGAACTGAC CGTGCTCGTG GAGGTGCCCG ATGCGCTGGT CAAGAATTCC 
CGCTATCTTG GACAATTGGA GGCTACCGTC AGCCCGCCCG ATCTTGATGA AGGCGAAAGC 
CGCCGGGTAG AAGTGCGCTT TCGCCTGCCC GAGGGCATGA CGCTCTTGAA CCCCGGCACA 
GAAGAAGTTA CGGTAAGCCG CAAGAAAAAA TAG
 
Protein sequence
MKSSDIPRRA PHLASLLVAV LAAVSMWYVV SVRERLEAQL EVTLDYYGIP ANLVITDGLI 
NKAVVRLRGP ETLLRSVTQS KLIQAVNLSH IKKGVTMVPL TAEHLGPGFR AFELIDVQPP 
RIAITADTLV ERAVPVRLTV DSPLRNGALT VENARVDPAT VTLRGPESVV EEISHVPVTI 
MADPTAAGST VHQVITLDTP SLVTAIPPTV KVQYSITSGR TTVSQRCKVE ISAENRRLYK 
VEPEELTVLV EVPDALVKNS RYLGQLEATV SPPDLDEGES RRVEVRFRLP EGMTLLNPGT 
EEVTVSRKKK