Gene Ddes_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1662 
Symbol 
ID7285365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1998980 
End bp2000131 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content60% 
IMG OID643582475 
ProductNADH dehydrogenase I, D subunit 
Protein accessionYP_002480239 
Protein GI220904927 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID[TIGR01962] NADH dehydrogenase I, D subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACCGC AGCATCCGGC CACACACGGC GTTTTGCGGG TGGACCTTGA GCTTGAGGGC 
GAAACCATCG TGCATTGCGA CCCGCAGGTC GGGTATCTGC ACCGGGGATT TGAAAAACTG
GCGGAAAAGT TCACCTATGC CCAGGCCCTG ACGCTTACGG ACCGACTGGA CTATATCGCG
GCCATGTCCA ACAACACAGG CTATTGCCTG GCGGTGGAAA AGCTGCTGGG TATTGAAGCG
CCCCTGCGCG CCCGGTACAT CCGCACCATT GCCTGCGAAA TGTCGCGCAT CAGTTCACAT
TTGCTGTGGC TTGCCACCCA CGCCCTGGAT ATCGGGGCCA TGACGGTTTT TCTTTACTGC
TTCCGTGAGC GCGAAATGCT GCTCAATCTT TTTGAAGACC TGTGCGGCGC GCGGCTTACC
CTGACGTATC CGCGCATCGG CGGTGTGCGG CAGGACGTGA GCGGCAGGTT CATGAGCGGC
CTTCAGGATT TTGTAAACAT TTTCCCCGGC CGTATTGTGG AATACGAGAC CCTGCTGGAT
ACCAACCGCA TCTGGCTCAA GCGCACCGTT GGCGTGGGCA AGGTCAGCGC GGATGAAGCC
CTGTCGTTGG GTCTTACCGG GGCCTGTCTG CGCGGTTCCG GCGTGGATTA TGACGTGCGC
CGCCATGCGC CCTATGATGC GTATGCCCTG CTGGACTTTG CAGTTCCTCT GGGTGCTGAC
GGGGATATCT ACGCCCGTTA TCGCTGTCGT ATGGAGGAAC TGCGCCAGTC TACGCACATT
CTGCAGCAGT GCATCGACGC CATGCCTCCC GGCCCCACGC TGGCCGAAGA CTCCCCGGAT
CTGCTCATGC CGCCGTCACG CTGGCACGGC ACGCCCGAAA CCACCCTTTA CGGCGGTGGG
CTGCGCGCCG TTATGCGTGA CAGAAATATC TACATGGCGG GCGATGTATT TGTATCCACA
GAAGTCCCCA AGGGAGAACT GGGTTTCTAC TTCATCTCCA ACGGCAGCAG CCGCCCGTAC
CGCATGCATG TACGTGCGCC GTCTTTCATA CACATCGGCG CGCTGGCAAG CATCGCCAGG
GGCGGGCTTA TCGCCGACCT GATCGCAAAT ATCGGAAGTC TGGACGTGGT GCTGGGCGAA
TCGGACCGCT GA
 
Protein sequence
MGPQHPATHG VLRVDLELEG ETIVHCDPQV GYLHRGFEKL AEKFTYAQAL TLTDRLDYIA 
AMSNNTGYCL AVEKLLGIEA PLRARYIRTI ACEMSRISSH LLWLATHALD IGAMTVFLYC
FREREMLLNL FEDLCGARLT LTYPRIGGVR QDVSGRFMSG LQDFVNIFPG RIVEYETLLD
TNRIWLKRTV GVGKVSADEA LSLGLTGACL RGSGVDYDVR RHAPYDAYAL LDFAVPLGAD
GDIYARYRCR MEELRQSTHI LQQCIDAMPP GPTLAEDSPD LLMPPSRWHG TPETTLYGGG
LRAVMRDRNI YMAGDVFVST EVPKGELGFY FISNGSSRPY RMHVRAPSFI HIGALASIAR
GGLIADLIAN IGSLDVVLGE SDR