Gene Ddes_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1549 
Symbol 
ID7285247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1856089 
End bp1857345 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content57% 
IMG OID643582360 
ProductUV-endonuclease UvdE 
Protein accessionYP_002480129 
Protein GI220904817 
COG category[L] Replication, recombination and repair 
COG ID[COG4294] UV damage repair endonuclease 
TIGRFAM ID[TIGR00629] UV damage endonuclease UvdE 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATACGCT ATGGCTTTGC ATGCAAAACC GTTGGTCTGC CCGGAGCGGC ACAAAGTAGT 
CTTACCCTGT CGCGTGCAAG CCGGGACAAT CTCCTGTCCG TCAGCCGGAA CAATCTTGGT
GCGCTGGAAA CCATGCTGCG CTACTGCCAC AGACAGTCTC TTGCGCTCAT GCGCGTCAGT
TCCGATATTA TTCCGCTGGC TTCGCACGAA GCGGTGCATT TTGACTGGCA GACCGAACTG
CGGTCCGAGC TTGAAAGCCT GGCCGCCCTT GCCCACCAGA GCGGCGTGCG CCTTTCCATG
CACCCAGGCC AGTACACTGT GCTCAACTCT CCCCGCCCGG ATGTGGTGCG CAAGGCTGTG
GCCGATCTGG CGTATCATGC GGCTTTTCTT GATGCCCTGC AGGCCGGGCC GGAGTGCCGC
ATAATCCTGC ACCTTGGCGG CGGCTATGGC GACAGGGAGT CCGCACTGCA ACGCCTGCGC
AGCAACCTGG CTGCCTTGCC CGCTTCCATC CTGCAAAGGC TGGCCCTGGA AAACGATGAG
CGCATCTATA CTATTGAGGA TGTTCTCGCA GTCTGCCGTG ATTTTGATCT GCCTGCCGTT
TTTGATATTT TCCATCACGA GCTGAACCCG CCCCCGCATG GCGACACACA GTACTGGCTT
GACCGTGCAG GGGAGACCTG GAACTCACGC AGCGGACGCC AGAAAATCCA TTATTCACAA
CAACTGGCGG GCGGCAAGCC GGGTATGCAC TCTCTTGCCA TTGCCATGCA TCCCTTTATG
CAACTGCACG GCCTGCTTGA AGAGCGCGCG CTTGATGTCA TGCTGGAGGT CAAAGACAAG
AATCTTTCGG CCATCAAATG TGCAAACCTG ACCCGGGCGG GCCTGCCGCG CAAAAACCTC
ACGGAAGAGT GGGCGCGCTA TAAATACCTT ATACTTGAAC GTAGCCCCGG CGTGTACTCG
GCCATACGCC AGCTGCTCAA AAGCGAAAAT CCGACAGCAG AGGCGTTTTA CGGCCTGCTC
GAAGACGCGC TTGCCTGTCG TCTGGAACCA GGCAAGGCCA GAAATGCCGC AGAACACGTA
TGGGGATATG TAAGCAGAAA TGCCCCGGCC AGAGAATCCG CCCGCATACT CAAAGACCTT
GAACTTCTGG GCAATGACCT TACGCCGCTG CCCCGCATCA AGCGTAAACT ACTGACCTTG
GCGGCGGATA ACAACGAAGA CTATTTGCTG CACAGCCTCT ATTTCTATAT AAACTAG
 
Protein sequence
MIRYGFACKT VGLPGAAQSS LTLSRASRDN LLSVSRNNLG ALETMLRYCH RQSLALMRVS 
SDIIPLASHE AVHFDWQTEL RSELESLAAL AHQSGVRLSM HPGQYTVLNS PRPDVVRKAV
ADLAYHAAFL DALQAGPECR IILHLGGGYG DRESALQRLR SNLAALPASI LQRLALENDE
RIYTIEDVLA VCRDFDLPAV FDIFHHELNP PPHGDTQYWL DRAGETWNSR SGRQKIHYSQ
QLAGGKPGMH SLAIAMHPFM QLHGLLEERA LDVMLEVKDK NLSAIKCANL TRAGLPRKNL
TEEWARYKYL ILERSPGVYS AIRQLLKSEN PTAEAFYGLL EDALACRLEP GKARNAAEHV
WGYVSRNAPA RESARILKDL ELLGNDLTPL PRIKRKLLTL AADNNEDYLL HSLYFYIN