Gene Ddes_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1515 
Symbol 
ID7285213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1807957 
End bp1808994 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content58% 
IMG OID643582326 
Productperiplasmic binding protein 
Protein accessionYP_002480095 
Protein GI220904783 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATGA GATGTATTGC CATAGGGCTG CTTGTGCTGC TTGCCATGCC GTGTTGCGCT 
GACGCGGCGA CCGATCTGGC CGCACCTTCC GGAAACGGAA GACACGCAGA GGGCGCACGC 
AGCATCTATT GCGCCACCCC GCCTTCCACA TTCACTCTGT ACGCCTTCGC GCCGGAGCTG 
CTGGCGGGCT GGAATACGCC TCTCCGGGAT TATGAGAAAA AATTTATCCC TGCCCGCTAC 
CATAATCTGC CGGTTCTGGG CGGCTGGTAT GGGCAGGGGT TTATCCCCGA CAGGGAAATG 
CTGTTGGCCA GCGGCATCAA AAAAGCCTTT TACCTTTCTA TGGGCGCTCA CGACCACCTG 
CCTATCGAGC AGACCCTGAC CAGCCTGGGC ATGCAGGTGA CGAGCGTACC CGGCGCAAGA 
CTGGCGGACA TGGCTCCCTG TTTTCTGGCT ATGGGCCGGG CGTATGGCCT TGAAGAGCGT 
GGAGCGGCTT TGGCCGCCTA TGCATTGGAG GCACTTGAAA AAGTATCTCG CGCCATGAAG 
GATTTGCCCC GGGAAAAATG GACAAGGATT TACGTAGCCC TTGAGGCTGA CGGCCTGGCC 
TCCATCTGTC GTCAGTCCAG GCGGGCAGAG GTGTTTGCCG CCGCCGGGGC CGTAAGCGTG 
CATGACTGCC CGCCTGGAGC GGAAGAAGCT TTTTTGCGCG TAACCTTTGA GCAGTTGATG 
GCTTATGATC CGGAAGCCAT ACTGGTTTTT CATCCGGCAC TCATGCGGCG TATTCCCACA 
GACGCCAAGT GGGCGGCCCT GTCTGCTGTG CGCGATGGCA GGGTGTATTT TATTCCGCGC 
GGCCCGTTCA GCTGGCTGGA GCGTCCCGCC ACCTATATGC GTCTGCTGGG CGTGCAGTGG 
CTTGCAAACA GGCTGCATCC AGATCGTTAT CCGGTGGACA TCAAGGCAGA GAGCAGGCAC 
TTTATGAAAC TTTTTTTCAA CCTGGACCTT GATAACGCCC AGGTGAACGA TCTTTTTGAG 
CCGTATGGCA CATTCTAG
 
Protein sequence
MHMRCIAIGL LVLLAMPCCA DAATDLAAPS GNGRHAEGAR SIYCATPPST FTLYAFAPEL 
LAGWNTPLRD YEKKFIPARY HNLPVLGGWY GQGFIPDREM LLASGIKKAF YLSMGAHDHL 
PIEQTLTSLG MQVTSVPGAR LADMAPCFLA MGRAYGLEER GAALAAYALE ALEKVSRAMK 
DLPREKWTRI YVALEADGLA SICRQSRRAE VFAAAGAVSV HDCPPGAEEA FLRVTFEQLM 
AYDPEAILVF HPALMRRIPT DAKWAALSAV RDGRVYFIPR GPFSWLERPA TYMRLLGVQW 
LANRLHPDRY PVDIKAESRH FMKLFFNLDL DNAQVNDLFE PYGTF