Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1498 |
Symbol | |
ID | 7285196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1789772 |
End bp | 1790125 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643582309 |
Product | hydrogenase expression/synthesis HypA |
Protein accession | YP_002480078 |
Protein GI | 220904766 |
COG category | [R] General function prediction only |
COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.130745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGAAA TGGCTATCGC ACAGAGCTTG CTGAAAATGG CGGAAGAGGA AATTACCCGT CAGGGCTGTA CCCGTCTTGA GGTGGTGAAC GTCAAATATG GCGCTCTCGC CGGACTGGTG CCGGAATCTC TTCAATTCTG CTTTGAAACC ATGATTCAGG GTACGCCCCA CGAGGGTGCG CGCCTTGAAA TGGAAGAATT GCCGTTGCAA CTGCACTGCC CTTTTTGCGG CGCAGACTTT GGCGGTGAAG GGCAGGATGC TCTTGTACAA CCCTGCCCCG GCTGCGGTGA GCAGTTCGGC CATGTGGTCA AGCAGGGCAG GGAGCTGTAC CTGAACCGCC TTGAGGCCAG CTGA
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Protein sequence | MHEMAIAQSL LKMAEEEITR QGCTRLEVVN VKYGALAGLV PESLQFCFET MIQGTPHEGA RLEMEELPLQ LHCPFCGADF GGEGQDALVQ PCPGCGEQFG HVVKQGRELY LNRLEAS
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