Gene Ddes_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1498 
Symbol 
ID7285196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1789772 
End bp1790125 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content57% 
IMG OID643582309 
Producthydrogenase expression/synthesis HypA 
Protein accessionYP_002480078 
Protein GI220904766 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.130745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAAA TGGCTATCGC ACAGAGCTTG CTGAAAATGG CGGAAGAGGA AATTACCCGT 
CAGGGCTGTA CCCGTCTTGA GGTGGTGAAC GTCAAATATG GCGCTCTCGC CGGACTGGTG
CCGGAATCTC TTCAATTCTG CTTTGAAACC ATGATTCAGG GTACGCCCCA CGAGGGTGCG
CGCCTTGAAA TGGAAGAATT GCCGTTGCAA CTGCACTGCC CTTTTTGCGG CGCAGACTTT
GGCGGTGAAG GGCAGGATGC TCTTGTACAA CCCTGCCCCG GCTGCGGTGA GCAGTTCGGC
CATGTGGTCA AGCAGGGCAG GGAGCTGTAC CTGAACCGCC TTGAGGCCAG CTGA
 
Protein sequence
MHEMAIAQSL LKMAEEEITR QGCTRLEVVN VKYGALAGLV PESLQFCFET MIQGTPHEGA 
RLEMEELPLQ LHCPFCGADF GGEGQDALVQ PCPGCGEQFG HVVKQGRELY LNRLEAS