| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1442 |
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| Symbol | |
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| ID | 7285138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1726873 |
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| End bp | 1729281 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643582251 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_002480022 |
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| Protein GI | 220904710 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.195548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTCA GACAAGCGCT CGGTTCGGGA CGTCCTCTTT TGCTTGACGG CGCCATGGGC
ACCATGCTTC AGGCTTCCGG TCTTCCTGCG GGTACAAGCC CGGAAGAATT TTGCATGGAA
AATCCCGATA TTCTGCGGGG TATCCATGCG TCCTACCTCA AGGCGGGCGT TGATCTGCTT
ACGTCTTGCA CCTTCGGCGG CAATGCTTAC AAGCTTTCGA AAAATCTTGA TGTTTTTTCT
TTTAACAAGC GTATGGCCTC GGTGGCGCGC GCGGCTGCGG CCGATGTGTC ACGCCCTGAC
GGCCGCCCGA TTTTCGTGGC GGGCAACGTG GGACCCACCG GACATTTCGC CAAACCTTTG
GGTCCTGTTG AACCTGCCGA GCTTATTGAA GTTTTCGCCC AGCAGATACG AGGGCTTGTG
GCCGGCGGGG CTGATCTTGT TTTCATCGAA ACCCAGTTTG ACCTGGCCGA GGCCAGGGCC
GCCGTGGTGG CCGCCAGACA GGTCTGTGAC CTGCCGGTAA TGGTTTCTAT GACTTTTGAG
CAGGGCGTAA GCCTTACGGG ATCTACCCCC GCCATATTTG CCGAAACCAT GCAAAACATG
GGCGTGGATG TGGTGGGAAC CAACTGCAGC CTCGGGCCGG AACAGATGGA GCCTGTGGTT
GCCGAACTTC TGGGCGTGTG CGCCTGCCCG GTCATGGCCG AGCCGAATGC CGGCCTGCCC
GAGCTGCGGG GAACGCAGAC GGTATTCCCG CTGGGGCCGG AGGACTTCGC CCGCAAGACA
GCTTCTTTTG CCCATATGGG CGCGCAGGTG CTCGGCGGCT GTTGCGGTAC CACACCCGAA
CATCTTGCGG CTCTGGCGCA CAGTCTGCGC GGCCTTGGCG AGGTGCGCCC CACGGGTGTG
AAGCGCAGCG GCATCTGCCT GACGAGCCGT TCGCAGATGG TGCGCATCGG CGCGGGACGG
CCTCTTGCCA TTATCGGCGA ACGTATCAAT CCCACAGGCA AAAAGCAGCT TACTCTTGAA
CTTCAGGAAG GGCGCTTTGA CACGGCCCTG CAATTTGCTG ATGCGCAGAT TGAGGCCGGA
GCCACTGTAC TGGACGTGAA TGTGGGCGCG CCGCTTGTGG ATGAAACCGC GCTTTTGCCC
GACCTGGTGC AGCGTCTGGT GGGGCGGCTC ACGGTGCCGC TTTCTCTGGA CTCATCCAAT
GCCCAGGCCA TTGCCGCCGC CCTGCCGTAC TGCCCCGGCT CTTTTCTGGT GAATTCCATC
AGTGGCGAAG AAGGCCGGAT GGAACTGCTG GGGCCTCTAT GCCGCGATTA CGGCGCGCCT
TTCATCCTGC TGCCGCTCGA GGGCGCAACC TTGCCCGAAA AGGCCGTGGA ACGGATCCGC
ACTGTGGAGA GCCTTCTTCT GCGGGCGGAA CGTCTCGGCA TTCCACGGCG GCTCATGATG
GTGGATATTC TGGCTCTGGC AGTCTCCTCC AGTCCGGACG GCGCGCGCCA GTGCCTTGAA
ATGACGCGCT GGTGTGCAGA GCAGGGCCTG CCGACAACCC TGGGGCTTTC CAATCTTTCT
TTCGGCCTGC CCGCGCGCGA CCTGCTTAAT GCCACATTTC TGGCCTACGC CGCCGGAGCG
GGACTTTCAT CGTGCATTGC CAATCCATCA GCCCAGCGCC TGCGCGAGGC GGCTGATGCA
CTCAAGGTGC TGGGCGAGCA TGATCCCCAT GCGTCTTCAT TCATTTCAAG TTACGCCAAC
TGGAAGCCCG GCGAAGGCAG CGTACTGCAA CGCCAGGGGG GCGGTGGGGC GTCCAAAAGC
CTTGGCGAGG CCGTACTCAA CGGCGACAGG GAAAATGTCC TGTCCCTGCT TGAAGCCGAA
CTGGCCGCAG GGGCCGAGCC TTTCAGCCTT GTGCAGGAAG TGCTTATTCC GGCTATTACC
GAGGTGGGCG CACGCTACGA ACGGCGCGAA TATTTTTTGC CCCAGCTTAT CCGCGCGGCC
GAAACCATGC AGACGGCTTT TGGTCATCTG AAGCCTCGCC TCGAGGCCGG GCGGGGGGCC
GAAGAGCGCC CTGTGGTGAT TATGGCCACG GTGGAAGGGG ATATTCATGA TATTGGCAAA
AATATTGTTT CCCTGCTTTT GGGAAACCAC GGTTTTGATG TGATTGACGC GGGCAAGGAT
GTGCCTGCCG AAGATATCGT GGCTTGCGCC CTTGAGCATA ACGCGCGTAT TATCGGCCTG
TCGGCCCTGA TGACCACGAC AATGGTGCGT ATGGAAGACA CCATAAAACT GGTGAAGGAA
AAAGGGCTGG CTATCAAGGT GATGGTGGGG GGCGCGGCTG TTACCCAGGC TTTTGCCGAT
GCGATCGGGG CCGATGCCTA CTGTGCGGAT GCCGTGGGCG CTGTGCGGGC CGCCAAGAAT
TTTATGTAG
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| Protein sequence | MTFRQALGSG RPLLLDGAMG TMLQASGLPA GTSPEEFCME NPDILRGIHA SYLKAGVDLL
TSCTFGGNAY KLSKNLDVFS FNKRMASVAR AAAADVSRPD GRPIFVAGNV GPTGHFAKPL
GPVEPAELIE VFAQQIRGLV AGGADLVFIE TQFDLAEARA AVVAARQVCD LPVMVSMTFE
QGVSLTGSTP AIFAETMQNM GVDVVGTNCS LGPEQMEPVV AELLGVCACP VMAEPNAGLP
ELRGTQTVFP LGPEDFARKT ASFAHMGAQV LGGCCGTTPE HLAALAHSLR GLGEVRPTGV
KRSGICLTSR SQMVRIGAGR PLAIIGERIN PTGKKQLTLE LQEGRFDTAL QFADAQIEAG
ATVLDVNVGA PLVDETALLP DLVQRLVGRL TVPLSLDSSN AQAIAAALPY CPGSFLVNSI
SGEEGRMELL GPLCRDYGAP FILLPLEGAT LPEKAVERIR TVESLLLRAE RLGIPRRLMM
VDILALAVSS SPDGARQCLE MTRWCAEQGL PTTLGLSNLS FGLPARDLLN ATFLAYAAGA
GLSSCIANPS AQRLREAADA LKVLGEHDPH ASSFISSYAN WKPGEGSVLQ RQGGGGASKS
LGEAVLNGDR ENVLSLLEAE LAAGAEPFSL VQEVLIPAIT EVGARYERRE YFLPQLIRAA
ETMQTAFGHL KPRLEAGRGA EERPVVIMAT VEGDIHDIGK NIVSLLLGNH GFDVIDAGKD
VPAEDIVACA LEHNARIIGL SALMTTTMVR MEDTIKLVKE KGLAIKVMVG GAAVTQAFAD
AIGADAYCAD AVGAVRAAKN FM
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