| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1425 |
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| Symbol | |
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| ID | 7285121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1704347 |
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| End bp | 1706485 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643582234 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_002480005 |
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| Protein GI | 220904693 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACAGA AGAACGAACA TCAGGGCGGG CAGTCGCAGC ACAGCCTTTT TGCCGCCGGT
CCCACGGGCG AAGAACGCCG GCGCGTCCAG TGGCTTACAG CCGAGCTTGA GCGTCATAAT
CACCTCTACC ATACGCTGGA CAGGCCCGAA ATCAGTGATG ACCAGTTTGA CGCCCTGTTT
CGCGAATTGC AGGATCTGGA AACCCGCTGG CCTGAACTTC GCTCGCTCCA TTCACCAACC
TTGCGCGTGG GGGGCGGGCT GCTGGAAGGT CTTGCCAAAA AGGCCCACAG TCTTCAGATG
TATGGTCTGG ACAACGTATT TTCAGCCGGG CAGTGGCAGG AATTCGCGGA GCGTATGGCT
CGCGCCTGGG GGGGAGATGT GAACGGTCCC CTGCCGGAAA GCTTCTGGTG TGACCCCAAG
CTGGATGGCC TGGCTCTGGA GATCATCTAT GCAGACGGCG TGTTGCAAGA AGCCCTTACC
CGGGGAGACG GCGAGGTGGG TGAAGTTGTC ACCGACGCTG TGCGTACCAT CCGCACCGTA
CCCCTGCGAC TTGCGGGGCC GGGGCCTTTT CCCGCCAGGC TTGAGGTGCG CGGCGAGGTT
GTCATGTATA AAAATGATTT TGCCGTCCTT AATGAAAAAC AGGAAGCCCT TGGTCTGAAA
ACCTTTGCCA ATCCCAGAAA TGCTGCGGCA GGAACACTGC GCCAGCTGGA CACTGCCATT
ATCGGTTCAC GCCCGTTGCG GTTTCTGGCT TACAGCCTTG GCCAGGCGCT TTGGACGCCC
GCGCCCGTCT GTCTGCTGCA GTCTGAAGTC ATGAGTCGGC TCAGGGAATA CGGTTTTCTT
ACTCCGCCGG ACGGCAGGCT GTGCAGCAGC GTGGCCGAGG TGGAGGAGTA TGCCCAGTGG
GTCAGGGAGC ACCGCGCCGC ATTCCCGATG GAAATTGACG GGGCTGTGGC CAAGCTGGAC
AATCTTGAGG CCCAGCAGGC GCTTGGTTTT ACCGCCCGGG CACCGCGTTT TGCCGTGGCC
TTCAAGTTTC CGGCCGAACT GGCACAGACC CTGCTGAAAG ACATTGAGAT ACAGGTGGGC
CGCACGGGGG TGCTTACCCC TGTGGCCATG CTTGAGCCTG TCTCTGTGGG CGGCGTGATG
GTCTCGCGTG CCACCCTGCA TAATGAGGAT GAAATACGCA ATCGCGATGT GCGGGTGGGT
GATACGGTCA TGGTGCGCCG CGCAGGCGAT GTCATTCCCG AGGTGGTAGG GCCGGTGCTG
GAAAAGCGCC CGGAAAACGC CCGGGAATAT GTTTTTCCCC ACACTTGTCC GGCATGCGGC
CAGCCTGCGT ACCGGGAAGA GGGGGAAGCT GCCTGGCGGT GCGAAAACAT GGCCTGTTCC
GCTATCCGCC TGCGGGCCAT CACGCATTTT GTGTCCAAGG CCGGTCTGGA TATCGCGGGC
GTGGGGCAGA AATGGATAGA ACAGCTGGTC ACCAGTGGCC GGGTGCAGTC TCCTGCTGAT
CTTTTTACTC TTACGGTGCA GGAACTGCTG GGCTTTGAGC GCATGGGAGA AGTGCTGGCC
CACAAGTTTG TGGACGCGCT TGCCCGCGCC GTACATTCTG CCACCCTGCC GCGCCTCATC
AGCGCTCTGG GTATAAGGCA CGTGGGTGAA CAGACCGCAC GCACCCTGGC TTTGCATTTT
GAAACGCTGG ATGAACTGGA AAACGCCGGC GCGGAAACGC TGCTGAGTCT GCCGGATGTG
GGACCGGAGG TGGCGTCATC CATCCATAAC TTTTTCAACA GCCCCGCCAA CCGAGAACAG
CTTGAGCGCT TCAGGGCGCT TGGCCTGTGG CCGCGCGGCG GCCGGTCTGG CGGCGGTTCT
TCCGGCAGCA CAGGCGAGGG CGGTTTGGCG TCCGGGCCGC TGGCGGGAAA AAATATTCTT
TTTACCGGAA CCCTGAGCAT GCCGCGCAGT GAAGCCGAAA AGCTGGCTGA AACCGCCGGT
GCCACGCCAC TTGGCGGGGT GAGCAAAAAA CTTGACTACC TTGTGGCGGG GGAAAAGGCG
GGCAGCAAGC TTGAAAAAGC ACAGGCGCTG GGCGTAACGG TACTCACCGA AGAAGAATTT
ATGACCATGT TGCGCGAAGC CAAAGCGGCT TCGGAATAA
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| Protein sequence | MVQKNEHQGG QSQHSLFAAG PTGEERRRVQ WLTAELERHN HLYHTLDRPE ISDDQFDALF
RELQDLETRW PELRSLHSPT LRVGGGLLEG LAKKAHSLQM YGLDNVFSAG QWQEFAERMA
RAWGGDVNGP LPESFWCDPK LDGLALEIIY ADGVLQEALT RGDGEVGEVV TDAVRTIRTV
PLRLAGPGPF PARLEVRGEV VMYKNDFAVL NEKQEALGLK TFANPRNAAA GTLRQLDTAI
IGSRPLRFLA YSLGQALWTP APVCLLQSEV MSRLREYGFL TPPDGRLCSS VAEVEEYAQW
VREHRAAFPM EIDGAVAKLD NLEAQQALGF TARAPRFAVA FKFPAELAQT LLKDIEIQVG
RTGVLTPVAM LEPVSVGGVM VSRATLHNED EIRNRDVRVG DTVMVRRAGD VIPEVVGPVL
EKRPENAREY VFPHTCPACG QPAYREEGEA AWRCENMACS AIRLRAITHF VSKAGLDIAG
VGQKWIEQLV TSGRVQSPAD LFTLTVQELL GFERMGEVLA HKFVDALARA VHSATLPRLI
SALGIRHVGE QTARTLALHF ETLDELENAG AETLLSLPDV GPEVASSIHN FFNSPANREQ
LERFRALGLW PRGGRSGGGS SGSTGEGGLA SGPLAGKNIL FTGTLSMPRS EAEKLAETAG
ATPLGGVSKK LDYLVAGEKA GSKLEKAQAL GVTVLTEEEF MTMLREAKAA SE
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