| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1385 |
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| Symbol | |
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| ID | 7285080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1659522 |
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| End bp | 1660499 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643582193 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_002479965 |
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| Protein GI | 220904653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.159221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTCTC CCTACAGCAG CAATCCGCCC GTCACCAACG GGCGCTGGCT TATCCGCAGA
AGGCCCAACA GCCTGTCACG GTACTGGCGA AATATCAGCC GGGCCGGCGG GGCGGACAGC
TATACGCGTT TTCGCGACAG CCTCCTGGTA CTTAATGCCA GAAATATCCC ACACAAAACC
ATTTCCCTGT CCGGCAGGGA GCATATTTAC GTGCCTCCGC TGCTGGAAGG CATAGCCCTG
GCAGAGCTGG CAGAGTTTTC TGCCGAGAGC CATAAGGCTG TTCCTGCCCC TACCCCGCTG
CGCGTGTATC GTCACAGCGC CCTGGCCGCC CTTTTCCTAC TGCCCCTGCT CGTCTGGCAT
GGCTGGCGTG CTGGCTGGTG GCCGGCCCCG CTCTTTCTGC CCCCACCGGA CACCTGGGCC
CCCGCAGGCA TGCTGGACAA TGTGCTGGTG CGCATTTATG ACCAATATTA CAGGCTGGCC
ACAGCGCTTA CCCTGCATGT AAGCCTGGCG CATGTGTGGG GCAACGTGGC CTTTGGCGCA
CTCTTTCTTT CCCTGCTTGC CAGGCTCACC GGTATAGGCA GAGCACTATG GCTCACTGTG
GCAGGAGGAA TCGCAGGCAA TGCCCTTACC GTAGTGTTGC GCCCCCGGGC TGTCACCAGT
ATGGGATTTT CCACAGCTCT CTTCGCCGCA GTGGGCGCGC TGGCAGGCTT TATGGCCATG
CATTCCGGCC AGCGCCGTAA GGCGGCCTTG CCTGTGGCCG CGGCAGTCGC CATCTTGGCA
ATGCTTGGCA CTGAAGGCGA AAATACTGAC TATGCCGCTC ATATAGCCGG GCTGTGCGGT
GGCCTTGTAC TAGGGGCCTG GGAAGCGTGG CGGACGCAAA AACGCTGGCC GGCTCTGCCC
CAGCTACCGG CAGGCGCTCT GGCCGCTGCT CTGCTTGCTG GCGCATGGTA CTGGGCTTTT
GTGGTATTGC CTGTATGA
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| Protein sequence | MRSPYSSNPP VTNGRWLIRR RPNSLSRYWR NISRAGGADS YTRFRDSLLV LNARNIPHKT
ISLSGREHIY VPPLLEGIAL AELAEFSAES HKAVPAPTPL RVYRHSALAA LFLLPLLVWH
GWRAGWWPAP LFLPPPDTWA PAGMLDNVLV RIYDQYYRLA TALTLHVSLA HVWGNVAFGA
LFLSLLARLT GIGRALWLTV AGGIAGNALT VVLRPRAVTS MGFSTALFAA VGALAGFMAM
HSGQRRKAAL PVAAAVAILA MLGTEGENTD YAAHIAGLCG GLVLGAWEAW RTQKRWPALP
QLPAGALAAA LLAGAWYWAF VVLPV
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