Gene Ddes_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1374 
Symbol 
ID7285068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1646148 
End bp1646894 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content47% 
IMG OID643582181 
Productprotein of unknown function DUF421 
Protein accessionYP_002479954 
Protein GI220904642 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.381341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAG CTCTCTGGCA GTCAGTCCAG CTATACGGAA ACATTGCCGT CAAACTTGCC 
GTGGGCCTTG CCACCTTTAT ATTTGTCTTT CGCACCACAA ACCGCTGCCA GCTCACGCAA 
ATGACGCCGG TTGACCTTAT AGGCAACTTT GTTATGGGCG GGATTTTGGG CGGCGTAATT 
TACAATCCGG ATATCGGCAT TACAAAGTTC ATTCTTGTTC TTGCCATCTG GCAAGTGCTG 
ATCGTGTCGG TAAATTTTTT ACGCATGCGT ACAGAATCCG GCCGGAAAAT GATCGTCGGC 
TCACCAAGAC CTGTTGTTAT CAAAGGGAAA TTTCTTCAGG AAAAATTTGT TGAAGCAGGC 
CTTGATATAG GCGATTTTGC AACACTCATA CGAATGCAGG GCATTCACTC CATGAAAGAA 
ATATGGAATG CCCAGATAGA ACCCAACGGC CAGCTTACAG TACAAAAAAA AGAAGACCCG 
CATATCTCCA ATGTTGTGCT CAACAATGGC GCCATGGTTG AAGCCGCTCT TGAGGTGATC 
GACAAGGATG AGGACTGGCT GAAAGCCGAG CTGCAAAAAC AGGGTTACGA TTCATACGAA 
AACATCTTTT TTGCGGAATG GAATGAACAC CGTGACGATG TCGGCAAACT TGCCGGAAAC 
CTGTATGTTG TTGAGCTGGA TAACAAAAAA GAAAGTAAAA ACAACAATGC GCCCATTCCG 
CCCCAGCAAA GCGGGCAACC AGCCTGA
 
Protein sequence
MDQALWQSVQ LYGNIAVKLA VGLATFIFVF RTTNRCQLTQ MTPVDLIGNF VMGGILGGVI 
YNPDIGITKF ILVLAIWQVL IVSVNFLRMR TESGRKMIVG SPRPVVIKGK FLQEKFVEAG 
LDIGDFATLI RMQGIHSMKE IWNAQIEPNG QLTVQKKEDP HISNVVLNNG AMVEAALEVI 
DKDEDWLKAE LQKQGYDSYE NIFFAEWNEH RDDVGKLAGN LYVVELDNKK ESKNNNAPIP 
PQQSGQPA