Gene Ddes_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1350 
Symbol 
ID7285044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1623286 
End bp1624698 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content59% 
IMG OID643582157 
ProductTetratricopeptide TPR_4 
Protein accessionYP_002479930 
Protein GI220904618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0181784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAGTC AGGAACAGTG GAACAGGGAT TTGCAGGCTG CCCTGGAGCC TCTGGCTCAG 
GGGTGCCCTG AAGACAGCCT TGCGCGGCTG CGTACGCTGT TACGCACATG TGACAATACC 
CCGTTGTGCC GCGCCACGAC CCTTGAGGCC ACGGCCCGTG TGCTGCTGGC TATGAGCCGG 
GGGGCCGAGG CTGTGTCTGT TATGGAAGAA GGTCTCGCTC TCTTGCGCAA TGCCTATGGT 
TCATCTTCTC CCTTAACTTT GAACCTGATG CAGAATCTGG CCCATCTCTG GCTGGAAACG 
GGAAGCTACA GCAAGAGCGA AGAGCTGGGA CTGGAAGCAG CTGCCGCTTG TGAGTCGGCC 
TTTGGCGCGC ATTCTCCCCG TTTGGCCAGC GCGTTGCTTC ACCTTTCTGC AGTGTATTAC 
CGCCGAAAAG AGTGGGACCG GGCGGAACAG TGCCTGCAAC GTGCCAGAGG CATATGGGAA 
GGGCATGCCC GCACGTCCGG GACGCTGCCG GACCAGCAAC TGGGAACCTG CCTGAACAAT 
CTGGGGCGCC TGTATGAAGA GCGCGGCCTG CTCGCTGCGG GCATAGACTG GCATCGCCAG 
GCCGTTGCCC TGCGTCGGAA GGTCTGCGGC GAGCACGAGG ACACTGCCTT TTCACTGGGT 
AATCTGGGCG TGGCGCTGGC TTCTGATGGG CAGTGGATCG AGGCCGCCCG TACCCTTGAA 
GAGGCGGTAG CCTGTTATGA AAAACTGGGT AAAGGCCGCA GCGCTGAAGC GGAAAGCTAT 
AAAAAAAATC TTGAGCTGTG CCGCAGGGCC TCGGCAGAGC AGGGGACGCA ACCGGTTTCG 
GGGTCGCAAT CTCTTGGGCA GGATGCGCGC GAAGCGCTGT TGGCGGAAAT TATCGAGCGG 
GAGCTTGTCA TGTTTCTGGC AACACCTAAT GAAGGCGGAA CAGCCATCTG CCAGCAGCGG 
CCAGACAGTT TCAGGGTCAT GAGGCGTATG GCCCATGAAC CACTGAACAC CGACACGCTT 
GCCTCGTATC TTGATGATCT GCGCAATGCC GAACTGGCGG GGCGCAACTT CATGATTGAA 
AAATACGCCC GCATGGATGA CCGGCTGCCT CCTTTAAGTG TAAGCCCCTT GCTGGATGAA 
ATTGCGGATG CGGAAGAAAT TTTTATGCGT GACGCTTCTG CAAAATATCC CAATGTGATC 
GTGCCTGACA ACCGGGGGGC TTTTAAAAAA TACCTCCGCT GCGAACTTGA AACCCTTTCG 
CCAGGCACAC TTGCCCTGTA TGCCCGGGAT CTGCGGCATG CCCGGCAGAC AGGACGCAAT 
ACGGCCCTGG AGCGTTACGC CTGCCTGGCC CGCCTCATGG GCAAGTCCAG CCTTGAAGAA 
CTTGAGGCTT CGGTTCGGGT TGCCGCTGTT TAG
 
Protein sequence
MVSQEQWNRD LQAALEPLAQ GCPEDSLARL RTLLRTCDNT PLCRATTLEA TARVLLAMSR 
GAEAVSVMEE GLALLRNAYG SSSPLTLNLM QNLAHLWLET GSYSKSEELG LEAAAACESA 
FGAHSPRLAS ALLHLSAVYY RRKEWDRAEQ CLQRARGIWE GHARTSGTLP DQQLGTCLNN 
LGRLYEERGL LAAGIDWHRQ AVALRRKVCG EHEDTAFSLG NLGVALASDG QWIEAARTLE 
EAVACYEKLG KGRSAEAESY KKNLELCRRA SAEQGTQPVS GSQSLGQDAR EALLAEIIER 
ELVMFLATPN EGGTAICQQR PDSFRVMRRM AHEPLNTDTL ASYLDDLRNA ELAGRNFMIE 
KYARMDDRLP PLSVSPLLDE IADAEEIFMR DASAKYPNVI VPDNRGAFKK YLRCELETLS 
PGTLALYARD LRHARQTGRN TALERYACLA RLMGKSSLEE LEASVRVAAV