Gene Ddes_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1311 
Symbol 
ID7285003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1554501 
End bp1555661 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content62% 
IMG OID643582116 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_002479891 
Protein GI220904579 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000182 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAA CGCCCAATCC AGCCCCACCG GGGCAGTCCG CGCCATCGGA AGCTCCGGAG 
GCCCCCCCGC AGCCCTGGTT CCGGCGTCCC TTTTTCTGGG GACTGCTGCT CTTTCTGGCT 
CTGCTGCTTC TCGCCGCATG GCTTTTTGGG AAGCAGTGGC AGGAAGCTGA AAGCCGCAAG 
GCAGAGGCGG CAGCGCAACT TGCCGAACTG CAACTGCAAA ACCAGGCCCG ACAGGATTTT 
ATTGAAAAGC TGCGCCTGCT TCTCAAGGAA GAGCCGTGTG AGGTGCAGCG CCGCCTTCCT 
CTTTTGCCCC CCCCCGCCGG TGTGGCCTGG CCGCCTCTGC CCGATTCCGC CACAGGAGCC 
GGAGGCGTAG CCGCCCCCCC CAACGCTGCA CCAGCACAGT CGCGGAGCAC TCGTCCGGTG 
TCGCCGCCCC AAGACTTTGC CGCCCTTATG GAACAGGCCA CGGTACTTGT TCTGGCCATG 
CAGCCCGAGG GGCTTTCTAT GGGATCGGGC TTTTTTGTAA CTTCGGGACA TGTGGTAACC 
AACGCGCACG TGGTTGGCCC TGCGGGCAAG GCCGTCATTG TCAGCAAAGC CACAGGCGCG 
CCCCTTGCTG CCCGTGTTCT GCAGGCAACG CAAAGCGCGG GACGTGACTT TGCGGTGCTT 
GCCGTCGAAA ATGGCCCGGG CATCACGCCA CTCCCGCTAA CCACTGAAGT CTGGCGCACG 
GAAAAAGTCA GCGCATGGGG CTTTCCCGGG GCCGTGACCA ACGATGACCC CAAATTTCTG 
GCCCTGCTCA AGGGTAATGA CGCGGCAGCG CCCGAGGTGG TTTATACCGA AGGTGTGGTC 
AGCGTCATAC TTGAACGCAA CCCGCCCCTC ATTGTGCATA CGGCTACCGT GTCACAGGGC 
AACAGCGGCG GACCGCTGGT CAACGACAAG GGCGAAGTGG TCGGAATCAA TACGTTCATC 
AAGCTGGACG ACGGATCTTA CAGGCAGTCC AGCCTGGCTA TTGTAAGTGC CAGCCTTGCG 
GATTTTCTGC GTGCTGCGGG AGTTCCCTTT ACTCTTGCTG CGCCCACGGC ATCAGGTCAG 
GAGAAATCCT CCGTGCCGGA ACAGACGGCA CAAAAAGGCG CCGCCCAGGC CGCCGGAAAC 
GAGCAGGGAG GCAAGCCATG A
 
Protein sequence
MSQTPNPAPP GQSAPSEAPE APPQPWFRRP FFWGLLLFLA LLLLAAWLFG KQWQEAESRK 
AEAAAQLAEL QLQNQARQDF IEKLRLLLKE EPCEVQRRLP LLPPPAGVAW PPLPDSATGA 
GGVAAPPNAA PAQSRSTRPV SPPQDFAALM EQATVLVLAM QPEGLSMGSG FFVTSGHVVT 
NAHVVGPAGK AVIVSKATGA PLAARVLQAT QSAGRDFAVL AVENGPGITP LPLTTEVWRT 
EKVSAWGFPG AVTNDDPKFL ALLKGNDAAA PEVVYTEGVV SVILERNPPL IVHTATVSQG 
NSGGPLVNDK GEVVGINTFI KLDDGSYRQS SLAIVSASLA DFLRAAGVPF TLAAPTASGQ 
EKSSVPEQTA QKGAAQAAGN EQGGKP