Gene Ddes_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1189 
Symbol 
ID7284871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1401550 
End bp1402875 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content54% 
IMG OID643581988 
ProductPeptidase M23 
Protein accessionYP_002479771 
Protein GI220904459 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000449419 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAAAA AAAGTATGTT TTCATCAGTG TTGGGTATTT TGGTAGTCGT TGCTCTTGGC 
GTAGGCGGCT ACACATTCTT TAAGGACCTT GAAGGGCCTG TTATTGACGT TTCGCCCAAC
ACCGGCAGAG TTTCCCCTGC CAGCGTGCTC AAGGTCAGCA TGAAGGATCC TTCAGGAATT
CGTTCTGTTA CAGTTGGAGT CCGAAAGAAT AACGTGCTCA ATGTTATTTT CAACAAACAT
TTTGATCAAT ACCTGCCCGA ACGCACTGTG GAGGTTCCCT TAAAGGACGC CAACCTGCGT
GAGGGAGCCT TTGATCTTGA GGTGCGCGCA ACAGACGGCT CTCTGGCCGG TTTCGGGCAG
GGCAACACCC GTACCGTGCA GCTTCCTATG CGCCTGGATA CACAGCCCCC GCGCATATCC
GTCAAAACCC TGCCCCCTAA CGTCCGCCGT GGCGGTGCTG CAGTTGTGCG GTATACGGTT
GACGAAGACG TCACCAACAG CGGGGTGCTG GTAGCCGGTT ATTTTGTGCC GGGCTACCTG
CAAAAAGACG GCAGCTATAT CTGCTTTTTC CCTTTTCCAT ACACTATGAC CGCCAAGGAC
TACAAGAACA GCGTGGAGAT TACAGCCACC GACCTGGCGG GCAACGTCAC CAAAAACCGT
CTGACAGTTA TGGCTTTTGA GCGTACCTTC AAGAGCGACA GCCTTGAACT GAGCGACGAC
TTTTTACTGA GTGTGGAAAA CAAGCTGCGG CACCTTGCGC CGAATGCAGC CAACCCGCTG
GAGTGCTACC TGTACATCAA CAACCAGGTG CGCGCCGCCA ACGTGGAAGA TCTGCGCAAT
ATCAGCAAGG ATACGGCATC GGCCATGTTG TGGAGTGGCG TTTTCCAGCG CATGCCCCGC
TCTGCCCCGC GCGCCGGATA CGCAGACCAC CGCTTTTATA ATTACCAGGG CAAGCTTGTG
GGCGAATCCT ACCATCTGGG CTTTGACCTC GCCTCCGTTC GCAATGATGA CGTGCCTGCC
GCTAACAGCG GTCGCGTAAT ATTCAGCGGA GACCTGGGCA TTTACGGCAA TATTGTGGTC
ATTGACCACG GCCTTGGACT CATGTCCCTC TACTCTCACC TTAACGACTC AATGGTCAAC
GCGGGCGATG TGGTGCAAAA AGGCCAAACC ATAGGGCATA CGGGAACCAC CGGCCTCGCT
TTCGGTGACC ATCTGCACTT CGGCATAATG GTGGGCGGTG TTGAAGTGAC CCCCCTCGAA
TGGCTTGATC CCAAATGGAT ACGTGACAAC ATCACCAGCC GTCTCGAGGC GTCCATGGCC
CAATAA
 
Protein sequence
MRKKSMFSSV LGILVVVALG VGGYTFFKDL EGPVIDVSPN TGRVSPASVL KVSMKDPSGI 
RSVTVGVRKN NVLNVIFNKH FDQYLPERTV EVPLKDANLR EGAFDLEVRA TDGSLAGFGQ
GNTRTVQLPM RLDTQPPRIS VKTLPPNVRR GGAAVVRYTV DEDVTNSGVL VAGYFVPGYL
QKDGSYICFF PFPYTMTAKD YKNSVEITAT DLAGNVTKNR LTVMAFERTF KSDSLELSDD
FLLSVENKLR HLAPNAANPL ECYLYINNQV RAANVEDLRN ISKDTASAML WSGVFQRMPR
SAPRAGYADH RFYNYQGKLV GESYHLGFDL ASVRNDDVPA ANSGRVIFSG DLGIYGNIVV
IDHGLGLMSL YSHLNDSMVN AGDVVQKGQT IGHTGTTGLA FGDHLHFGIM VGGVEVTPLE
WLDPKWIRDN ITSRLEASMA Q