Gene Ddes_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1168 
Symbol 
ID7284850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1375824 
End bp1377047 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content58% 
IMG OID643581967 
Productrecombination factor protein RarA 
Protein accessionYP_002479750 
Protein GI220904438 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTAA GCAAGCCCCT GCCTGAGCGC ATGCGCCCGG ATGATCTGGC CCTTTTTCTT 
GGGCAGACGC ATCTCGGCAG CCGCCTTCGT TCCCTCATGC AGGCCAAGCG TCTGCCGAGC
CTGCTGTTTT TTGGCCCCCC GGGTTGCGGA AAATCCACAC TGGCCCTTTT GCTGGCCAAG
GGCACAGGAA AAACTTTTCT GCGCCTGAGT GCGCCCGAAG CCGGATTGCA GCACCTGCGA
CGGTCGCTTT CAGGCATTGA AATTCTTGTG CTGGATGAAC TGCACCGCTT TTCCAAAGCC
CAGCAGGATT TTTTTCTGCC CCTGGTGGAA TCGGGTGACC TGACCCTGCT CGCCACAACG
ACGGAAAATC CTTCCTTCAG TGTAACGCGA CAGCTCCTTT CACGCTTGCA TGTGCTCCGC
CTCCGCCCGC TGGGCCGTAC AGAACTTGTA GAGCTGGCAC GCCGCGGTGC GATGGACCTG
CAGGTGGAAA TGCCTGACGA GCTGGCCGAA CTTCTGGCAG GAGTGGCCCA CGGAGATGCG
CGCACACTGC TGAACCTTGT GGAATATGTG GCAGCCCTGC CCTCTGATTT GCGCGAGATC
GAGCATATAA AAGCCGCCCT GCCCGAAGTG CTGGTGCGCC ACGACAAGGA CGGTGACAAC
CATTACGAGC TTGCTTCAGC CCTCATCAAG TCCATTCGTG GAAGTGATGT GGACGCGGCC
CTCTACTACC TGGCCTGCCT TCTTGAAGGC GGCGAAGATC CCCGCTTCAT CTGCCGCCGC
CTTATTCTTT CCGCCTCTGA AGATGTGGGC CTGGCCGATC CCAATGCCTT GCAGCTGGCC
GTGGCATGCC AGCAGGCCGT AGAATTCGTC GGCATGCCAG AAGGCTTCAT TCCGCTTGCG
GAAACTGTGA CCTACCTGGC GCTGGCGCGC AAAAGCAATG CGACGTACGC TGCGTACCTT
AACGCGCAGC GTGAAATCAA GCTCAACGGG TCGCATCCGG TTCCCCTTCA CCTGCGCAAC
CCTTCCACGC AAATGCATAA AGAATGGGGA TACGGCAAAG AATACAAATA TCCCCACAAC
TATCCGGACT CCTGGATTCA GCAGACCTAT CTGCCGCAAG AACTTGAAGG ACGGCGCTTT
TACCAGCCGC GCGATAACGG CGAAGAGCCT CGCCTCACGC AATGGTGGCG CAGGCTGCAC
AAAATCAAAA AGACGGAAGA ATAG
 
Protein sequence
MSVSKPLPER MRPDDLALFL GQTHLGSRLR SLMQAKRLPS LLFFGPPGCG KSTLALLLAK 
GTGKTFLRLS APEAGLQHLR RSLSGIEILV LDELHRFSKA QQDFFLPLVE SGDLTLLATT
TENPSFSVTR QLLSRLHVLR LRPLGRTELV ELARRGAMDL QVEMPDELAE LLAGVAHGDA
RTLLNLVEYV AALPSDLREI EHIKAALPEV LVRHDKDGDN HYELASALIK SIRGSDVDAA
LYYLACLLEG GEDPRFICRR LILSASEDVG LADPNALQLA VACQQAVEFV GMPEGFIPLA
ETVTYLALAR KSNATYAAYL NAQREIKLNG SHPVPLHLRN PSTQMHKEWG YGKEYKYPHN
YPDSWIQQTY LPQELEGRRF YQPRDNGEEP RLTQWWRRLH KIKKTEE