| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1135 |
|---|
| Symbol | |
|---|
| ID | 7284817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 1334770 |
|---|
| End bp | 1335999 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643581934 |
|---|
| Product | aromatic amino acid transporter |
|---|
| Protein accession | YP_002479717 |
|---|
| Protein GI | 220904405 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0814] Amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.55679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCC GCTTTTCTCC TGTGCTTGGC GGCACCACTC TTGTTGCCGG CACGGCCATA
GGCGCCGGTA TGCTGGCCTT ACCGATGGCC TCGGCCGGAA TGTGGTTTTC GTGGTCAATC
GGGCTGATGC TGATTTCCTG GATCATCATG CTGCGTTCAA GCCAGGCACT GCTGGAAGTG
AGCATGCATT TTGAACCCGG GGACAGCTTC CATACAATGG TCCGCGAACT GCTGGGACCC
AAATGGAGTC TCGTGAATGG CTTCGCCGTT GCCTTTGTGC TCTACACCCT GGTGTATGCC
TATGTAAGCG GGGGCGGATC CATAATCGAG CAAAGCATTA CCTCCATAAC CGGCACCGCG
CCCCCGAGGC TGCTCAACAG CCTTGTATTC GCCCTGCTGC TCACAGTATT TATCTGGTGG
AGTTCCGAAG CGGTCGACAA GTTTTCCATC CTGCTTGTGG GCGGCATGGT CATATCTTAC
TTTATTTCCG TCAGCGGCAT GATAACCCAC TTGCGGGTAG ACACACTGCT GGACCGTGGT
GGCAGCGGCG GAGAAATGAT CTTTCTGTGG GGGGCCGTTT CCACCTATCT GACGTCCTTC
TGTTTTCACG CTTCTGTTCC GAGCCTGGTC AAGTATATGG GCAAAGAGCC GCGCACCATT
GATGCGAGCC TGCGCTACGG CACAATCGTG GCTCTGGTCT GCTATATATC CTGGCTGACT
GCCGCAGACG GCAACATTTC GCGCGCGGAC TTCAGAGGCG TTATTGAAGC GGGCGGCAAC
GTTGGCGACC TGATGGCCGC AGCAGGCAAC AACCTGAGCA GTTTTTTGAT TCTGCGGATG
CTTGAAGGAT TTTCGCTTCT GGCCGTTTCA ACTTCTTTTC TGGGAGCAGG CCTGGGACTT
TTTGACTATA TGGCCGACCT GTGCAATTTT GACAACAGCC GCTCCGGAAG AACCAAGACC
CTGTTGGTCA CCTTTGTTCC GCCTATCCTG GGGGGCCTTA TCTGGCCTGA CGGCTTTTTG
CCCGCCATCG GCTGGGCTGG TCTGGCATCG GCATTCTGGG CAGTCATCAT ACCGGCCCTT
TTGCTCAGCA ACAGCCGCAA GCGCTATGGC AAGGCCGTGT ACACTACGCC GGGCGGCCGC
CTGACAGTGC CGCTGCTTCT GGCATATGGC TGCTTTGTCG CTGTTTGCCA TACGCTTTTT
GTTTTCAATC TTTTACCCAT GTACCGCTGA
|
|---|
| Protein sequence | MDFRFSPVLG GTTLVAGTAI GAGMLALPMA SAGMWFSWSI GLMLISWIIM LRSSQALLEV
SMHFEPGDSF HTMVRELLGP KWSLVNGFAV AFVLYTLVYA YVSGGGSIIE QSITSITGTA
PPRLLNSLVF ALLLTVFIWW SSEAVDKFSI LLVGGMVISY FISVSGMITH LRVDTLLDRG
GSGGEMIFLW GAVSTYLTSF CFHASVPSLV KYMGKEPRTI DASLRYGTIV ALVCYISWLT
AADGNISRAD FRGVIEAGGN VGDLMAAAGN NLSSFLILRM LEGFSLLAVS TSFLGAGLGL
FDYMADLCNF DNSRSGRTKT LLVTFVPPIL GGLIWPDGFL PAIGWAGLAS AFWAVIIPAL
LLSNSRKRYG KAVYTTPGGR LTVPLLLAYG CFVAVCHTLF VFNLLPMYR
|
|---|
| |