Gene Ddes_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1042 
Symbol 
ID7284723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1219506 
End bp1220612 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content57% 
IMG OID643581843 
Productprotein of unknown function UPF0118 
Protein accessionYP_002479627 
Protein GI220904315 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.840746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA CAATGCCCCG CTTGCTCTAC CTGCTGGCCG TACTGGCCTG GTATCTGCTG 
CTGCTGCCCA ATCCCGTCAC AATCTTTATG GCGGCCTGTC TGTCTTGCCT CACCCTGCCG 
CAGTACCGCA AACTGCGGCA AAAAGCCCGG GCCTGGCGAA TCCGCATTGA ACGCAGCCGG 
CCGGATTCAC GCAAGCGACG CCTTCTCATC TCCTTTGTCA ATTCATCGCC GCTTTACGGA 
TATATCACCA TGCTGATAGC GGCCCTTATC GTTCCCATTG CCGTGCTGGT TCTTCTGGTA 
TCGCCGCAGG CAGCAGCCGG TTTTACGCGG CTGCGTGAAC TGCAGGCCAA TAATTTTCAG 
TTGCCCGTTG AGTGGGTAAA CTACATCCAG CAATGGAGGC AGAGCCTTAC AGAGCATCCG 
CGCCTTGAGC GCGCCTTCAA TGATCTGCTC ATGCGGCTGG ACAGCTTTTT TGATACTGCC 
ATGGGTCTGC TGCTGTCGCG CGGCGTAGAT TTCCTTGGGG GCACCATGAC CGTGCTCTGG 
ACCAGCTTTC TCTTTGTAAG CCTGACAGTG ATATTTACCA TCTATTCCCG CCGTGTACGC 
AAGATCACGG GCAGGATATT CCATATTTCC CAGTCCATGC TGCGGCGCTT CATCACGGCC 
ATACACCGGG CGCTGCGCGG CATCATGCTG GGCATTGTTC TGGTAGCGCT GGCCCAGGGC 
TTTCTGTGCG GCGTCGCCTT TGCTGTGGCA GGCGTCAACC AGCCTGCCTT CTGGGGATTA 
CTGGCGACAC TGGTAGCCCC TATCCCCATG GTGGGCACAG CTCTTGTATG GCTGCCCCTG 
TGCATTTCGC TCTGGTTTAC CGGCAAAAGC ATGGCCGCCA TAGGGTTGGG ACTGTGGGGA 
ATGCTGGCCG TAGCGGGTGT GGACAACGTA CTGCGTCCTC TTTTTCTGCG GCAGGGTATC 
AAGGCCCCTT TCTTTGTGCT GATTATCGCC ATCCTCTGTG GACTTTCCAG CTTTGGCCCG 
GTGGGGCTTA TTGCCGGTCC CGTGCTGCTG GCCTTTGCCA TGCAGGCTGT GGAGGAAGCA 
AACCGTATCT ACAAGTACAA TGCCTGA
 
Protein sequence
MTQTMPRLLY LLAVLAWYLL LLPNPVTIFM AACLSCLTLP QYRKLRQKAR AWRIRIERSR 
PDSRKRRLLI SFVNSSPLYG YITMLIAALI VPIAVLVLLV SPQAAAGFTR LRELQANNFQ 
LPVEWVNYIQ QWRQSLTEHP RLERAFNDLL MRLDSFFDTA MGLLLSRGVD FLGGTMTVLW 
TSFLFVSLTV IFTIYSRRVR KITGRIFHIS QSMLRRFITA IHRALRGIML GIVLVALAQG 
FLCGVAFAVA GVNQPAFWGL LATLVAPIPM VGTALVWLPL CISLWFTGKS MAAIGLGLWG 
MLAVAGVDNV LRPLFLRQGI KAPFFVLIIA ILCGLSSFGP VGLIAGPVLL AFAMQAVEEA 
NRIYKYNA