Gene Ddes_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1006 
Symbol 
ID7284686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1174283 
End bp1175095 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID643581806 
ProductPeptidase M23 
Protein accessionYP_002479591 
Protein GI220904279 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAACG CCATACTCCT GTTGAATCTG CTCCTTGTAA CGGCAGCCTG GGGCCGACTG 
CCCGCTTTTG CGGATGAACC AGGCCATCTT TCCAGCCCGG CGCGCGACCA GGCGCACAGC
GCCCATGCGC TGCCGTCAGA CAAAAGCGGA CCGCCACCGG CAGCCGCCCA GCAAGATGAC
GCGGCTGCAA AAACAGAGTC CGTCGCAGAA TCCCTGCCCG CTGCATTGCA GGTTCGCCAG
CTGCCGCCGC TTGAAGAAAT GGTAACATCG CCCTTTGGCC CGCGCCGCAT GCCCACCTGG
CTGAGCCGCC GGGGCATGGT GGTGCGCGAG CACAACGGCG TTGACCTGCG TGCCCGCCTG
GGCTGGCCTG TGGTGGCCTA CAAAGGCGGC GAAGTCATCC GTTCCGGCGA AGACGGCCTT
TCAGGCATCG TTGTGGATAT CCGGCAGGAT GACGGCATGA CCGCCCGCTA TGCCCACCTT
GAAAAAACGC TGGCGCGCAA GGGGCAAAAA GTTCAGCGCG GCGAAAAAAT AGGTATTGTG
GGCTGTACGG GGCGCACCAC GGGGGCGCAC CTGCACTTCG GCCTGCGTGA TGCCGGGGGC
AACCTGGTGG ACCCCCTGCC CTTCCTGTCC AGGGCTGAAG ACGTTCTGCG ACCGGACCCC
GACGCCATTC CGGAGGAGCT TGCGCCGCAA AGCTGCGGCC CCGTGATGCG GGGACGCAAT
GGCCGCCCGG TACGCCCGGG CCGCAGCCTG AAAGAACTGG AAAACTACAG CCCGCCGCCC
ATCCCGGGAT GGGGAGAAAA TTCTCCGAAA TAA
 
Protein sequence
MRNAILLLNL LLVTAAWGRL PAFADEPGHL SSPARDQAHS AHALPSDKSG PPPAAAQQDD 
AAAKTESVAE SLPAALQVRQ LPPLEEMVTS PFGPRRMPTW LSRRGMVVRE HNGVDLRARL
GWPVVAYKGG EVIRSGEDGL SGIVVDIRQD DGMTARYAHL EKTLARKGQK VQRGEKIGIV
GCTGRTTGAH LHFGLRDAGG NLVDPLPFLS RAEDVLRPDP DAIPEELAPQ SCGPVMRGRN
GRPVRPGRSL KELENYSPPP IPGWGENSPK