Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0978 |
Symbol | |
ID | 7284658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1140205 |
End bp | 1143207 |
Gene Length | 3003 bp |
Protein Length | 1000 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643581778 |
Product | hypothetical protein |
Protein accession | YP_002479563 |
Protein GI | 220904251 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.263512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAGTT CGCCTTTTCT GGTTTTTCCC TGGCAGCGCC CCTTTCTGCC CGCCCTCAAG GAGCATCTGC ACGAGATCAC GGGCGGACGC CCCGGCTCCG CCCTTGTTAT TGTGCCGCAC AACCGCCCCT GGCGATATAT GGCGCAACTC TATGCCGCAG ATGGCTACAC GGGCCTGTTG CCCAAGGTTT TGCCCCTGGC CGATGCTGTG GGCATCTGGC GGGCTTCAGG CAGCGCTGCC CCCCTGCACA CGGCCAACAC GCTGGACCGC GTTGCCCTGC TGCATGCCTG CGTTAACACG CTGTCGCGCG AGGACGAAAC GCTTGCCGCC CGTTTTGCAC GTATGGACAT GGCCCTCTTT CTGCCCTGGG GGCTGCGCCT GGCAGCCCTG CTGGAAGAAA TGTACGGACA GATGGTGGAA ATCAGGGATA TTGCCCATGT TGAAGACGAA GTAGCCGCGC CTGCGGCCGC TCTGCTGGGC GCTCTTGGCC GCATCAGCCA CGCCTATGAA TCCGCTCTGC TGGAAAAAAA CTGGACCACG CCCGGCCTTG ACCTTCTCAA TCTGGCACGC GGCGATGCCC CCATTCCTCC GCTGCTACAG CCCCAGGATG GCCGTCCCGT ACTGGTGGCG GGCTTTTATC TGCTCACGGG CGGTGAAGAC CATCTGCTGC GCTGCCTCTG GCAGGCCGGG GCGGACATCT GCCTGCATGG CGATCCGGCC CTTGCTGAAA ACAGCCGCCC GCACTGGGCC TGTGAGGAGC TGGCCGCGTG GATGCGCCGC TGGAAAGCAC GGGCAGCCAC TGCCTTGCAA CTTGATGAAG ATGAAAAAAA TCATCGTCCC GAATACCGTT TTTTTGCAGG TTATGACTGT CATTCACAGC TTGCCGCCCT GCATCGCGAC CTAAAGCGCG CAGATCCAAC TGATGGCACA GCAGAAAAAA CCACCCGCCC CGAGAATGAC GGCAGCCCCA TCCCTGTGGA GTCTGGGCAT TCCACGGCCA TTGTACTTAC GGACAGCTCT TTGCTTATGC CGGTGCTGCA CCACCTGCCG CATAAAGACG TCAACGTGTC CATGGGCTAT CCGCTGGAGC GGTCCCCGCT GAACCGCCTG CTGGATGGAC TGCTGCGCCT GCAGGCCACC AGAAGCGATG AAGGCCGCTA CTACTGGCGT CATCTTTTGC AGTGCCTGCG CCATCCATAT GTGAACATGC TGCGTACCCG CGATGCGTAC GGGCAGCCCC TGCTGCTGCG TGACGCCCTG CGGCCGCTGG AGCGCATCAT CCGTGAGGGA ACCCGCTTCG TGGACCTGGA TGAGGTTATC CTGGAGTGCC GGGGGCAGTT GCCCGAAGCG CTGGCCCAGC TGCTTGAAGA AACACTGGAG GCCCTCGTGC GCGCCCCGGC CGGAGCTGCG ACCACAGAAG ACATGGCCCG TGTGCTGCAT GGCCTGTGCT CCTTTCTGCG CTGCCGGGGT GATGACCTGT GGCGGCACTT TCCCCTGGAC GCCGAGGCCA TGTACAGGCT CATGCGGCAG ACCGTACCTG TTCTGCGCGA AAACCTGCTG GCCCGCACGC CCTTTCCCCT GACCACCCTG CACGGCATGA CCCGCGAAGT ACTCGGGCAG GAGCGCGTGC CTTTTGAGGC CGATCCCCTC ACGGGACTCC AGGTTCTCGG CATGCTTGAG ACGCGGCTGC TGCATTTCGG GCGTGTGTTC ATCGTGGACG CCACGGACGA CAGGCTGCCC GGCAATCCCG CGCAGGATCC TCTTTTGCCG GATTCTTTGC GGCAGGTTCT GGGCCTGCCC GATTCCCGCC GCCGGGAAAG GGCCGCCGCG CACACCCTGT ACCGTCTGTG CGCCGGAGCG CAGGAAGTTT CGTTTTTCTG GCAGGAGGGC ATCAGCCGTT CAAGCCTTTT TGACGGCAAA AAAAGCCGCA GCCGTTTTGT GGAGCAGTTG CTCTGGCAGG AAGAACTGGC CCGCGGGGCC GTGCTTGCCC CGGGTGAACC ACCGCTGGAA ACCGCCGTAT GCGAGGTTCG TGCCGCGGCC TCGGGGGAAA AGCAGCTTGA GCGCAGTGCC GACATGAATG ATGCGCTGGC GCGCCTGTTG CGCGAACCGC TGTCCGCCAC CAGACTGGAC GTTTACCTTC AGTGCCCCCT ACGCTTTGCC TGGCAGTATC TGTGCGGGCT GCGTCCCCCC AAGGAAATTA ATGAAGGAGA TGACCCCGCC GCCGTAGGAA CCTGCATTCA TGACACGCTC AAGGCCCTTT ATGAGCCGTA CCTGAATAAA ACTGTGCGGT CCGGCGACAT CTCGGCCGAA ACGGTCCGCG CCCGCTTTTA TGAACAGCTT GAGGCGCACG GCCTGCGCAA ACTGCTGCCC GCCGACAGCT GCCTGATGCT GGAAGAAGCT GCTCCCATGC GCCTTATGCG CTTTCTTGAA AACCAGCCCG CCGACGTGAC CATCATGGCA CTGGAAAAAG AGCTTAAGGT TCCCCTGCGG CTGGCCGGGC GCGATTATGC TTTTGTGGGC GCAATGGACC GCGTGGACTG GCGCGACGGC CTGTTCTACG TGCTGGACTA CAAAACCGGC GGCATTAAAA AACTTGATGG CAGCCTGTGG ACAGACCTGG CCTTTTTTTC CCGTGCCGGG CAACTGTGCG ACACCCTGAC CCCCGCGCAG GAAGCTGGTG AAAGCCATCT GCAACAACTG GAAGCTCTCT TCAGCCAACT GCGGGAACGC CTGCCGAGCC TGCAGCTTCC CTGCTATCTG GCCATGGCAC AGGCCAGCGG CATGACCCCC CTGAGCGATG CGGCCCTGGT GGAACTGCGC GACGACGGCA GGGAGCATCC CCTATTCGGC GGCCTTGTGG ACGAAGACCT TGATGCGGCT CTTGGCTTTT GCCGCACAGC ACTGGCCCTG CCCCTGCTGC ACATGGAATA TTCGCCCTGC TTTGCGGCAC GCCCGGACAA GCACTGCCGA TGGTGCCCCT ATGCGGGCTT ATGTTCTGTA TAA
|
Protein sequence | MSSSPFLVFP WQRPFLPALK EHLHEITGGR PGSALVIVPH NRPWRYMAQL YAADGYTGLL PKVLPLADAV GIWRASGSAA PLHTANTLDR VALLHACVNT LSREDETLAA RFARMDMALF LPWGLRLAAL LEEMYGQMVE IRDIAHVEDE VAAPAAALLG ALGRISHAYE SALLEKNWTT PGLDLLNLAR GDAPIPPLLQ PQDGRPVLVA GFYLLTGGED HLLRCLWQAG ADICLHGDPA LAENSRPHWA CEELAAWMRR WKARAATALQ LDEDEKNHRP EYRFFAGYDC HSQLAALHRD LKRADPTDGT AEKTTRPEND GSPIPVESGH STAIVLTDSS LLMPVLHHLP HKDVNVSMGY PLERSPLNRL LDGLLRLQAT RSDEGRYYWR HLLQCLRHPY VNMLRTRDAY GQPLLLRDAL RPLERIIREG TRFVDLDEVI LECRGQLPEA LAQLLEETLE ALVRAPAGAA TTEDMARVLH GLCSFLRCRG DDLWRHFPLD AEAMYRLMRQ TVPVLRENLL ARTPFPLTTL HGMTREVLGQ ERVPFEADPL TGLQVLGMLE TRLLHFGRVF IVDATDDRLP GNPAQDPLLP DSLRQVLGLP DSRRRERAAA HTLYRLCAGA QEVSFFWQEG ISRSSLFDGK KSRSRFVEQL LWQEELARGA VLAPGEPPLE TAVCEVRAAA SGEKQLERSA DMNDALARLL REPLSATRLD VYLQCPLRFA WQYLCGLRPP KEINEGDDPA AVGTCIHDTL KALYEPYLNK TVRSGDISAE TVRARFYEQL EAHGLRKLLP ADSCLMLEEA APMRLMRFLE NQPADVTIMA LEKELKVPLR LAGRDYAFVG AMDRVDWRDG LFYVLDYKTG GIKKLDGSLW TDLAFFSRAG QLCDTLTPAQ EAGESHLQQL EALFSQLRER LPSLQLPCYL AMAQASGMTP LSDAALVELR DDGREHPLFG GLVDEDLDAA LGFCRTALAL PLLHMEYSPC FAARPDKHCR WCPYAGLCSV
|
| |