| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0746 |
|---|
| Symbol | |
|---|
| ID | 7284420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 879550 |
|---|
| End bp | 882000 |
|---|
| Gene Length | 2451 bp |
|---|
| Protein Length | 816 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643581542 |
|---|
| Product | Oligosaccharyl transferase STT3 subunit |
|---|
| Protein accession | YP_002479332 |
|---|
| Protein GI | 220904020 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.395223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCATC AGAGCCTGGA AAACAGCTCT TCGGAGCAGA CAGCGAACCA TCCTGCCTGC
AATGCCGGCG GCGGCTGCAA TGATGCCGTT GCCCACACTG CCGAACATTC CTGCGCAACC
TCCACTGCCC ACAGCGTGGC CCTCCGCGAA AGGGGGCATC CGCTGGCGCT GCCGCGCGCC
GTGCATCTGG GGTTGCCCCC CGGGCCGGAC GTGGCGGGCT ACTGGTTGCG GGGCTTTTTC
TGGGGAGTTG TCACGCTTGT GCTGGCTTTC GGCCTGCGTA TGCTGGAATG GCCCTGCTGG
CAGGACCCCG AGTTTCGCCT GGGCAGCCAG TGGCTGCTCG CCACGCACGA CGCCTATCAC
TGGGTGGCCG GGGCTGAGGG CATTGGCCTG GCCGTGGGGC ATCCCATGGC CGAAATGCTC
CGCTGGATGG CGGACGCCCT CGGAACCTAT CCGGCGGCGG TGGCCTTCTG GTTTCCGGCG
GTGCTGGCAA GCTTTGTGGC CCTCATTGTC TACGCCTGGG TATGGGCGCT GGGCAGCATG
GAGGCGGGTG TGGCCGCGGG GCTGCTTACC TCGCTGGCGC CGGGCTTTTT GGCCCGGACA
TTACTTGGCT ATTATGACAC CGACCTTGTT ACGCTGTTTT TCCCCCTGCT TATGACCCTT
GCCCCGGCAA GCTGGGCCAT GCGCTACATG CTGCTGCCCC AGATGGTGCT GCGCCGCATG
GCTATCGGCG CAGGCATCAT GACCGCACGG CGTCTGTTCA GCAGGGGGCT GCCCGAAGAC
AAGCTGGTCC GCCAGCTTGG GCAGGGCGAA CACCTGGGTA ATCCTTTACG TTGGCAATGG
GTTGTGCTGC TGGGTTGCTC TGGCGTCATT TCGTGGTGGA CCCAGGAATG GCATTCGGTT
TTTCCGTATC TTATCCGCTA TAACGTCATC CTGCTGGCTT TCATGAGCCT TATCATGGCC
CCTCGCGGGC GCCGGGCCTT GCTGCTTCTG GGCAGTCTTG CCTACGCGCT GCCCACACTG
ACAGGGCCTG TGGGGCTTGT TTTCAGTCTG CTGCTTCTGC TGGCGGGTAC GCGCCCCGGC
CTGAAGGCAC GGCGTGTGCT TTGCCGTCCG GGGGTGCTTT CCCTGCTGTG GGTGGGCGTG
GCCTTTCTGT TGGTGCAGGG TGAAATTCTC ACCACCCTCA CCAACCACGT CAATGCCTAC
CTGAAGCATG CGGGCGATGC TAAAAGCACG GGAGAAGGGG CGGTGCTCAT GTATCCCTCG
GTGGCCCAGT CCATCATTGA GGTGCAGGAC CTGAGCTTTG CCGCGCTGTT TCCCTATTTT
CATCCCTGGA TGGAAGCGTC CATTGTTGGC CTTCTTGGCT TTGTGGTGGT GATGGTGCGC
CGGCCAGGCG CGCTGTTTCT GCTGCCGCTG GCCGCCTTGG GGCTTTTGAG CACCAAGCTT
GGCGGGCGCA TGGTCATGTT CGGCGCGCCT GTGGTGGCGG TGGGGCTGAC CCTGCCGCTG
TTCTGGACGT GGCAGCGGCT TTTGCGCACC AGCCTGCGGG GTTCCGTGGC GGGCCTGCTG
ACGTCGGCGG TGCTCATCGC CCTTATGGTG GCCCCCTTTG TGGACATGAT ACCTGCCATG
TCGCAAGGGC CGATGATCAA CCGGCGCCAT GCAGAAGCCC TTACCCGCGC GCGCACGATG
ACGCCCGAGG ACTCCATGCT CTGGCTGTGG TGGGACTGGG GCTACGCCGC GCACTATTTC
GCGCACCGTG CCACCATAGC TGATGGCGCA CAGCACGCCG GGCCATCGCT TTATCTGCCC
GCTGCCGTGT TCGCCACCGA CAACGCCCGT TTTGCGCGCC AGCTTATCCG GTACACGGCG
CAGCGCGGCA ATGAGCCTGG CAATGTTTTT GAAGGGCTGG ACGGAACGTC GGCCCAGGTG
CTTATGGACC GGTTGCGGTC TGATGAAACG CCACTTATTG AGGCCAGAGG ACGGCTTTTT
GTGGTGGTGA GTTTTGAGAT GCTGCGCCTG GGCTTCTGGA TAAGCAATTT CGGCAACTGG
AATTTTATTA CCCATTCGGG CGAGGGCGGA GCACTTTCCA TTGTGCCGCA GGAGCTTGCC
TACCGGCTTG ACTCAGGCGA AGTGCGCCTT GAGGGCAGCA CCAGCGCCAT TTATGCGTCG
TCCATCAATG TATTTGAAGA AACGGGTGTT ACCCGGCGCA ATTATGTGCA GGAATGGTTT
GACGCCCACC CCGATGCGTC GCCGCAGGAG CAGCAGGATT TTCTGTCCCG ACGGCGCAAC
GTCAATTTTC TTTTCAACAG GATAACGGAC GAAAAGCTGG CCATGGACGA GGGGCTGTAC
AATTCCCTTA TGGTGCAGCT GCTGGTGGGC GACCCGCAAA GCCCGCGTTT TTCACCATAC
TTCAAGCTGG TGTACGATAA TGTTTTCGCC AGGATTTACG AGGTATTGTA A
|
|---|
| Protein sequence | MPHQSLENSS SEQTANHPAC NAGGGCNDAV AHTAEHSCAT STAHSVALRE RGHPLALPRA
VHLGLPPGPD VAGYWLRGFF WGVVTLVLAF GLRMLEWPCW QDPEFRLGSQ WLLATHDAYH
WVAGAEGIGL AVGHPMAEML RWMADALGTY PAAVAFWFPA VLASFVALIV YAWVWALGSM
EAGVAAGLLT SLAPGFLART LLGYYDTDLV TLFFPLLMTL APASWAMRYM LLPQMVLRRM
AIGAGIMTAR RLFSRGLPED KLVRQLGQGE HLGNPLRWQW VVLLGCSGVI SWWTQEWHSV
FPYLIRYNVI LLAFMSLIMA PRGRRALLLL GSLAYALPTL TGPVGLVFSL LLLLAGTRPG
LKARRVLCRP GVLSLLWVGV AFLLVQGEIL TTLTNHVNAY LKHAGDAKST GEGAVLMYPS
VAQSIIEVQD LSFAALFPYF HPWMEASIVG LLGFVVVMVR RPGALFLLPL AALGLLSTKL
GGRMVMFGAP VVAVGLTLPL FWTWQRLLRT SLRGSVAGLL TSAVLIALMV APFVDMIPAM
SQGPMINRRH AEALTRARTM TPEDSMLWLW WDWGYAAHYF AHRATIADGA QHAGPSLYLP
AAVFATDNAR FARQLIRYTA QRGNEPGNVF EGLDGTSAQV LMDRLRSDET PLIEARGRLF
VVVSFEMLRL GFWISNFGNW NFITHSGEGG ALSIVPQELA YRLDSGEVRL EGSTSAIYAS
SINVFEETGV TRRNYVQEWF DAHPDASPQE QQDFLSRRRN VNFLFNRITD EKLAMDEGLY
NSLMVQLLVG DPQSPRFSPY FKLVYDNVFA RIYEVL
|
|---|
| |