| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0646 |
|---|
| Symbol | |
|---|
| ID | 7284318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 783159 |
|---|
| End bp | 785639 |
|---|
| Gene Length | 2481 bp |
|---|
| Protein Length | 826 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643581441 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_002479233 |
|---|
| Protein GI | 220903921 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTC CCCTGCTAGT GGCTCTGGCC GGGCAGCCCA ATTGCGGCAA GTCCACACTG
TTCAACATGC TTACCGGGGC GCGCCAGCAC GTGGCCAACT ACCCCGGAGT TACCGTTGAG
AAAAAGACAG GATATTTTGA CCTCGGCGGC CGCAAGGTAG AGCTTGTGGA CCTGCCGGGA
ACCTACAGCC TCACCTCCTA TTCGCTGGAA GAAAAAGTGG CGCGTGATTT CATCCTTGAA
GCTTCGCCCC AGGTCACCAT CAACGTGGCC GACGCGGCCA ACCTCAAGCG TCATCTTTAC
CTGACCCTGC AACTGCTGGA AATGGAAGCG CCGCTCGTAC TGGCCCTTAA CATGATGGAT
GTGGCCGAAC GGCGCTCTAT CAAGGTTGAT GTGGATGGGC TGGCCAACGA GCTGGGCATT
GCCGTTGTAC CCACGGTGGG TAAAAAGAGC AGCGGCGTGC AGGCATTGCG CGCGGCCCTG
ACCACCGCAG GGGAGGGCGG GCCGAGGTCT GCGTTTGCCG TGAATTACGG CCCCATGGAG
CCGTATCTTG CCGATCTTGC TGCCCTGCTT GCCAATGAGG AAGCCCTGGC CGGACTGCCC
CTGCGCTGGC TTGCTGTGAA GCTTATGGAG AATGACGAAG CCGCCATTGC CCTGGTGCAG
AAGCGCTGCG CAGAGGGGGC CGGCATTCCG GCCAGGGTGT TCGCCATGCG CGAGAGCTTT
GCCGCGCAGG GCGTCAATGC CGAAAGGCAT GTAGCCTTTG CCCGCCACCG CACGGCCGCG
GCTCTGGCTT CGCGGCATGT GACCCTGCCC GCGCAGGGAA CCACAAGCCT TTCCGACAAG
GCTGACAGGT TTGTCTGCCA CAGGTTTTTC GGCCCGGTGA TTCTGCTCGC CATTCTGCTC
ATCCTGTATC AGGTATCCAT CGTTTTTGGC GGGGATGTGG CGGCCATGAT CTGGCCCCTG
TGGGACAATG CCCAGAATGC CCTGGCGGGA CTTTTGCCCG CATCCGGCTT TCTGGAAGAT
CCTCTTCTGC GTTCCCTGGG CGTGTGGGTT ATGCGCAGTG TTACGGCCAT TCTTAACTAT
CTGCCCATAT TCTTTCTGCT TTTTTCCCTT ATCGCTATTC TTGAAGACAG CGGATACATG
CCGCGTATGG CCTTTATTCT TGACCGCGCC TTTCGCCGTT TCGGCTTGCA CGGCCAGTCC
ACGCTGCCGC TTATTCTCGG CGGCGTATAT GTGGGCGGCT GCGCCATCCC CGCAGTCATG
GCGACCAGGG CGATTCCGGA CGAGAAAGCC CGCCTGGCTA CCATTCTTAT CGCACCAATG
ATGAACTGCC TGGCCAAGGT GCCGCTGTAT CTCATACTGA TCAGCGCCTA CTTTGCCGCC
AACAGCGGCA TGGCCATGTT CTTTATTGCC ACCATTACCC TGTTTATGGC CCTTCCTGTG
TCAAAGGCCC TTTCGCTTAC CCTGTTGCGG GGGAAACCCA GTGCGCCCTT TATTATGGAG
ATGCCGCCCT ATCACCTGCC CACCATCAGG GGAGTACTTG CGCGCGCCAT CGAGCGGGTG
TGGATTTTCA TCCGCAAGAT TTTCACCGTG GTGCTGGCTG TGGCCGTGGT TATTTTTGCG
CTCATCAATT TTCCCGGTCT TGGGGAAGAG CGCATGGCCG TGTACGAAAA AAAATCCACA
AAAGCCATGA GCGATTTTGT CAAGGCTGTG GACAAGACCG CGCTGGCCGG GCAGTTCACC
CTGGATGACG TAACGCCTCT GCTGCTTTTT GAAGAAGACC TCAAGGATGC CAAACGCAGC
GTGACAGATC AGGAAGCCTC AAACAAGATT GATGCGGTTT TTCAGGAAAA AAGCCCGATC
TACTTCACCA TAGTGCGCGC TGTGGGGGCG GACGGCAAAG CCCTGCGCCC GGCGCTGCGC
AAGCTCATCA GTGCGCGCAA GCAGCTGCGT CGTGAACTGC GCGAAGAAAC CTTCGAGCAC
AGCGCCCTTG GTATTGCGGG CAAGGCTCTG GAACCGGTGA CGCAGTATGC CGGCTTTAAC
TGGAAGATCA ATATTGCCCT GCTTTCGGCC TTTGCGGCCA AAGAAAACAG CGCCGCCACC
CTCGGGGCCA TTTACGGGCT TGATGGCGAT GCGCCTGTGC AGGACAGCAT GCGTGAAGAC
GCTACCGGCT TTACCCCGTT GCATGCCCTT GCGCTCATGC TGTTCATGGC CCTGTATCCG
CCCTGCGTGC CCACCTCCGT TATGGTGCGG CTGCAATCCA ATTCCACGGG CTGGATGCTT
TTTTCCATCA TCTATCAAAC CTGCCTGGGG CTGGCGGTGG CCGTTCTTGT GTTCACCGGC
GGGACGTTAC TGGGGCTTTC TGGCTGGCAG GCCATGTGGA TATTCTACGG CCTGTGCGTG
GCGCTCACCA TCGTTATGGG GATGATACCC GAGCCTGAAA GCAGAAAAAA GGTGGACGCT
AAAAAGCCGG TGACGGCATA A
|
|---|
| Protein sequence | MSSPLLVALA GQPNCGKSTL FNMLTGARQH VANYPGVTVE KKTGYFDLGG RKVELVDLPG
TYSLTSYSLE EKVARDFILE ASPQVTINVA DAANLKRHLY LTLQLLEMEA PLVLALNMMD
VAERRSIKVD VDGLANELGI AVVPTVGKKS SGVQALRAAL TTAGEGGPRS AFAVNYGPME
PYLADLAALL ANEEALAGLP LRWLAVKLME NDEAAIALVQ KRCAEGAGIP ARVFAMRESF
AAQGVNAERH VAFARHRTAA ALASRHVTLP AQGTTSLSDK ADRFVCHRFF GPVILLAILL
ILYQVSIVFG GDVAAMIWPL WDNAQNALAG LLPASGFLED PLLRSLGVWV MRSVTAILNY
LPIFFLLFSL IAILEDSGYM PRMAFILDRA FRRFGLHGQS TLPLILGGVY VGGCAIPAVM
ATRAIPDEKA RLATILIAPM MNCLAKVPLY LILISAYFAA NSGMAMFFIA TITLFMALPV
SKALSLTLLR GKPSAPFIME MPPYHLPTIR GVLARAIERV WIFIRKIFTV VLAVAVVIFA
LINFPGLGEE RMAVYEKKST KAMSDFVKAV DKTALAGQFT LDDVTPLLLF EEDLKDAKRS
VTDQEASNKI DAVFQEKSPI YFTIVRAVGA DGKALRPALR KLISARKQLR RELREETFEH
SALGIAGKAL EPVTQYAGFN WKINIALLSA FAAKENSAAT LGAIYGLDGD APVQDSMRED
ATGFTPLHAL ALMLFMALYP PCVPTSVMVR LQSNSTGWML FSIIYQTCLG LAVAVLVFTG
GTLLGLSGWQ AMWIFYGLCV ALTIVMGMIP EPESRKKVDA KKPVTA
|
|---|
| |