Gene Ddes_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0608 
Symbol 
ID7284280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp734334 
End bp734879 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content56% 
IMG OID643581403 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_002479195 
Protein GI220903883 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.450498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAGG TTTTGATGAT GACCGTAGCG GTTTGCATGC TCATGGCCGG AGCGGCCCTT 
GCGGCTGACA GCAACGCCGT GCCCGCCGCC AAGATTGGCG TAGTGGACAT GCAAACTGTG
GCCACGCAGA GCGAACCCGC CGAGGCCGCC AAAAAGCAGA TGGAACAGAA GTTCGGCAAA
GAACGCGCCG AACTGGAAAA GCAGGGCGAA GCCCTGAAGA AAAAGGCCGA ATCGCTCAAA
AATCCCAAGG TCAGCGAAGA AAAAAAGCTG GAGTTCATCC GCGCCAAACA GGACCTGGAC
CAGAAGACCC GCAACTTCCT GCGCAAGGTT GAGCAGGAAG AAGTGAAGCT GCGTCAGGAC
ATGGTGACCC TGGTCTTCAG CGCTACCTAT GAAGTGGCCC GCACCAAGGG CTTCAACTTT
GTGGTGGACG TGACCGCGGG CGGCGTTCTG TATGCCGACC AGTCAATGGA CCTGACCCAG
GACGTGCTCA CCGAAGTGAA CAGACTTTAC AAAGAAAAGA AGAACGACAA GGGCGGCAAA
AAATAA
 
Protein sequence
MRKVLMMTVA VCMLMAGAAL AADSNAVPAA KIGVVDMQTV ATQSEPAEAA KKQMEQKFGK 
ERAELEKQGE ALKKKAESLK NPKVSEEKKL EFIRAKQDLD QKTRNFLRKV EQEEVKLRQD
MVTLVFSATY EVARTKGFNF VVDVTAGGVL YADQSMDLTQ DVLTEVNRLY KEKKNDKGGK
K