Gene Ddes_0530 details

Gene Information

• Locus tag: Ddes_0530
• ID: 7284197
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
• Kingdom: Bacteria
• Replicon accession: NC_011883
• Strand: -
• Start bp: 638041
• End bp: 641118
• Gene Length: 3078 bp
• Protein Length: 1025 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643581322
• Product: flagellar hook-associated 2 domain protein
• Protein accession: YP_002479119
• Protein GI: 220903807
• COG category: [N] Cell motility
• COG ID: [COG1345] Flagellar capping protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATCA GTATATCCGG CTCAAACTCC ATATCCGGCC TGAGCAACAT GGGTACCGAT 
TTTGATACCG TGCTTGCCAA GCTCAAAAAG GTGGAGTCCA TCCAGCTCAA CCGTCTGACC 
GCGTGGAAGT CCGACTGGAA TCTGAGGTAT GAAGCGTTCG GCTCCATCAT TGAGCAGATC 
CAGATCGCCA GCAACGTACT CGGAACCCTG AGCAACCGGA ACAATTTCGT CACCAAGAAT 
GTCGCCTCCA GCAACGAGCA TGTTCTTACC GCTGTGGCCA ACGCCTCGGC CCAGGACGTG 
CAGCACTCCA TCAACGTGCT GCAAACGGCC AACAACGCTG TTTGGGCCAA TACCGGGCAT 
GTATTCAGCT CCAAGAACGA CATCATCAAC GATACCGGCA CCGACCAGTA CTTCAAGTTC 
ACCTATGCGG GCGTCACCAA GGAGATAAAG GTTCCGCCCA AGACCACGCT GGAATCCTTT 
GTCAGCATGG TCAACAATTC CACCGATAAT CCCGGCATCA AGGTGAGCAC GGTACAGACC 
GGCGCGGGCT ACGTTTTTCA GGTGGCCGGC AAGAGCACCG GCGCGGCCAA CGATCTTGTC 
ATCCACGACA GCGGCCTTGT GGGCATGAAC TCTGCGGGCA GCACCTCGGC ATGGAGAACG 
AACAATTCTC TCAATCTTGC AGAATCACTG ACCAATCCCA CAAAATACTC CTATGACCTG 
ATCATGGAGG ACGGCGCAAA ATTCAAAGTT GCCATTACCG GCGACAAGAC CAACCAGAAT 
CTGGCAGATC AGATAAACGC CCAGACAGGG CGCAACGTGG CCAGCCTGGA CAGCAGCGGC 
AACCTGACCC TTACGGGTGT GGCCGCCATG TACCAGCGCG ACACGACAAC CACAGAAAAA 
TCCATACCCG CCAGCACCAA AGTTGCCCTT ACGTCCGGCG GAGCCAACGA TACGCTGAGC 
AGCGACCTGA CCGTCACCAT GCAGTATGAC GACGGCATCA CGAGCGGCGA GCGCACGGTC 
ACCATCAAGG CAGGCACCAC CATGCGCGAT GCCCTCGCCC AGATGGCCCA GGCTTCCGGC 
ATGAAGTCGG CGGACATGAG CATGGACGCA CACGGTGTTT GGTCCGTCAA GCTTGATAAT 
ATTACCAATA TAAGCTTCAG CGGCGATCAG GCGGCATCCT ATACCCCCAC CTATACCGCA 
GCGCAGATGG GAAACCGCGT AGGCGACCTT GCATCCGCCA GCACGGCGCT GGTTTTCAAG 
GCCGACATGC TGGACAAGGC CATCGGCGGC AATAATCCCG ACGGCAGCAT GTTCACGTAC 
ACCATTGTGG GCAAGGACGG GGTTGCAAAA AACATAGCCA TTGCAAATAC CGCCACCTAT 
CAGGACCTGG CCGATAAAAT TGCCGCAGAA ACCGGGGCAA CCCTTGCCAC AAACAACGGC 
AATCTTTCCC TGTCGCTGGA TGATACCGTC AAGTTCTACC TCAGCCAGGG AGCAGGCGGC 
GGCATGGACG GCCTTACTGC AAACACCGCC ACTACCACCA CCAATACGGG CATGCTCCCG 
GACGGCACGC TGGACAATCC ACAGCCGGAC CTCAACTATA CCATCACTCT TAATGACGGT 
ACGCCCATCG GTGTCGGCCC CATAGCCAGC GGCTCCTCCA TGCAGGATGT GGTGAACGCC 
ATTCAGGCCA CCCTGAACAG CGACCCCGCC GCCCAGGCCG CCGGAGCCAC CGCCAAGCTT 
GTAAAAGCGG ACGGCACCCC CTGGACCGGC GAGGCCGATG GCCCCGCCTA CCTTGAAGTC 
GCCAACGTGC AGGGAGTCAG CGGGCCGGGC ATCAAGGGGC AGGTGGCCTC ATCATCCAAC 
TGGAACATCC AGCGGTCCAC CAATGCCCGT TTTACCGTGG ACAACTGGCC CGTAGAGATG 
GAATCCGCCA CCAATACGGT CAGCGATGTC ATTGAAGGAG TGGTCTTTAC CCTGCAGGAC 
AAGGGGCAGG CGCGCATCAA TATCAGCACC GACATCACCT CGGTGGAAAA ATCCATCCAG 
ACATTTCTGG ATGCCGTAAA CTCTGTCCTG CTGACCATCC GCGAGTTCAC AAGCTTTGAC 
AAAGACAAGG CCACCACAAC CAACGACCCC AAGCTGGCCG ACAACGACAA CTACAGCCCG 
TCGCAGCTTA CTGCGGAAAA AGGCGGGCTT TTGCAGGGCA ACTATGGGGT GCAGCTTTTC 
AAATCACGCT TCAACAGCCT GTTGACCGGA TCGCCTCCGG GCTTCAAAAG CCGCACCAGC 
GCTGAAGACG TGCTTTCCGG CGATGTGCTC GCCAACCTGG CCAACCTGGG CATCAAGGTG 
AACAACAATG AGGCCAGCGA CAAGTTCGGC CTGCTGGAAA TAGCGCCCTC GTCCTCCATT 
GCCGCCCTGC AGCAGATGGA CCAGGAAAAC TATAACGACA TGATCACCAA TAACCTGGAA 
GCCGTGGTGG ATTTTTTCTG CACCGAAGGC ACAGGAACCA CCACGTCGCC GGATTTCCGC 
TACGGCAGCC ATGTTCCCGG CATTACCAAA GCCGGCTCAT ATGATGTAAC GTATACTGTC 
GATGCGCACG GCAATATTGA AAAAGTCATG GTGGGCGGTG TGGAGGCCAA GCGCGATACA 
AGCATGCCCG GCTACTATTA CAGCGTGGCT TCAGGCGATG GGCGCGGTCT TGCCATTCTG 
ATTGACGACC TGAGCGAAGG CGAACATACA GGCCAGGTGC GCATCAAAGA AGGTCTGGTG 
CAGTCGGTAA ACAGCTTTCT GAAAAGCGAG CTGGTATTCA ATGATGTGAA AATGTCCGGC 
ACAGACCCGG CCAAAACCGC CGACGCCATT GCCCTCAAGT CGCAGAACGG CGCACTGATG 
GTCCTGCGTG ACAACTACAA GACCATCATG GAAAATATCG ATAAAAAGAT CGGCAAAGAA 
CAAAGCCGGC TGGCCCTCTG GGAATCGCGG CAAAAAAAAT ATTTCGCCAA TCTGGAAACC 
CTGCTGAACA ACTATGGAAC CATGCAAAAA CAGCTTGAGT CACAGATTGC CAAGATGAAC 
AACAGCAGCA AGAGCTAG 

 

Protein sequence

MAISISGSNS ISGLSNMGTD FDTVLAKLKK VESIQLNRLT AWKSDWNLRY EAFGSIIEQI 
QIASNVLGTL SNRNNFVTKN VASSNEHVLT AVANASAQDV QHSINVLQTA NNAVWANTGH 
VFSSKNDIIN DTGTDQYFKF TYAGVTKEIK VPPKTTLESF VSMVNNSTDN PGIKVSTVQT 
GAGYVFQVAG KSTGAANDLV IHDSGLVGMN SAGSTSAWRT NNSLNLAESL TNPTKYSYDL 
IMEDGAKFKV AITGDKTNQN LADQINAQTG RNVASLDSSG NLTLTGVAAM YQRDTTTTEK 
SIPASTKVAL TSGGANDTLS SDLTVTMQYD DGITSGERTV TIKAGTTMRD ALAQMAQASG 
MKSADMSMDA HGVWSVKLDN ITNISFSGDQ AASYTPTYTA AQMGNRVGDL ASASTALVFK 
ADMLDKAIGG NNPDGSMFTY TIVGKDGVAK NIAIANTATY QDLADKIAAE TGATLATNNG 
NLSLSLDDTV KFYLSQGAGG GMDGLTANTA TTTTNTGMLP DGTLDNPQPD LNYTITLNDG 
TPIGVGPIAS GSSMQDVVNA IQATLNSDPA AQAAGATAKL VKADGTPWTG EADGPAYLEV 
ANVQGVSGPG IKGQVASSSN WNIQRSTNAR FTVDNWPVEM ESATNTVSDV IEGVVFTLQD 
KGQARINIST DITSVEKSIQ TFLDAVNSVL LTIREFTSFD KDKATTTNDP KLADNDNYSP 
SQLTAEKGGL LQGNYGVQLF KSRFNSLLTG SPPGFKSRTS AEDVLSGDVL ANLANLGIKV 
NNNEASDKFG LLEIAPSSSI AALQQMDQEN YNDMITNNLE AVVDFFCTEG TGTTTSPDFR 
YGSHVPGITK AGSYDVTYTV DAHGNIEKVM VGGVEAKRDT SMPGYYYSVA SGDGRGLAIL 
IDDLSEGEHT GQVRIKEGLV QSVNSFLKSE LVFNDVKMSG TDPAKTADAI ALKSQNGALM 
VLRDNYKTIM ENIDKKIGKE QSRLALWESR QKKYFANLET LLNNYGTMQK QLESQIAKMN 
NSSKS