Gene Ddes_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0465 
Symbol 
ID7284130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp565778 
End bp567886 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content62% 
IMG OID643581256 
Productsurface antigen (D15) 
Protein accessionYP_002479055 
Protein GI220903743 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0729] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.9475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTTG CTAAGCCCGC ACATACGGCG TATATTGCCG CCATGCGTGC TGCACCCTGC 
AAAAAGCCCC TGAATTTCTT CCGCTCTGAA CGCGCCGTGT TCTTTCCCCT GCCTGAGGCG
AATCCGGGGG CCGGGGCATT GCGCTGCCTG TTGCTGCTGC TTTTGACGCT GTGCCTTTGC
GGTTGCGGCC TTCTGAAGCC CAAACCCGAC GATGCCATGT CCGGGCAGGC GCAGGAGCAG
GAATCCCTTG AAGCCGCCTG GCGCGGTGAG CCGGTGCCGT ACTCCCTGCG CATCAAGGTA
GAGGATGGCC CGTCCTCCCT TGAAGGCAAG ATGAAATCCG TAAGCCAGCT GGCGCAGCTT
GCCAATGAAC CGCCCGACAG TACGCTTGCC CTGGAACGCC GCGCCCGCGC CGATGTGGAC
ACGGCCGTTC GCCTTCTGCA TTCCCAGTGT TACTATGAAG GTTCGGCCTC TTTCAGCTTT
GATGAAGAAG CCAGGCCCCT GCGCGTCACG CTGACCCTTG TGGCAGGGCC GCGCTATACC
CTTGGCCGGG CCGACGTAGT CTACGAACCA TCGCCGGACG TGCCGGCTCC CTTTAAAGAC
CGCCAGCGCG AGGTAGGCTT TTGGGGACTG CAAACCGAGC CTGTTCCCCC ACCGTCCTTT
CCCCCGGTGC TGCCTGGCGT TGCCGTGGGC AAACCTGTTG TGGCAGACAC CCTGCTGGAC
GCGGTGGAGG CCCTGCCGGA AAAGCTGCGC ACTCAGGGTT ACCCCCTGGC TGCCGTGGCC
CAGGCCCGCT ACACCCTTGA TCCAGAAAAA AAGCAGGTCA ATGCCGACAT CAGCATCAAT
CCCGGCCCTC CCGCCCTTAT GGGCGGCGTG GACGTGACAG GAAACAAGGG CGTCAATGCC
GCCTACCTGC AACGGCTGAC CCCCTGGATT CCCGGCGATG AGCCGTGGGA CACGGAACTT
ATGGACGATT ACGCCAACCA CCTGCGCGGG CTCGGCCTTT TCCGTTCTGT AGAAGTGCGC
CCCAAGGAAG AACTGCTGGC CGGAAAAGAC GCCGCTGACA AAAGCGGCGT TCCGCTCCGC
AGCAAGGACG GCCCTGCCGT GCTGCCCATT GAGGTGGCCG TGAGCGAACT GCCCTTCCGG
TCCGTGGGCG GCAGCGCGCG CTACGACACA GATACCGGCC TGGGGGTGGA AGGCTTTTGG
GAGCACCGCA ATCTTTTCGG CAACGGCGAA AAACTGATGG TCAGCGCCCC TATTGCCACG
CAGGTACAGG GCATCAAGGC GGCCTTTGAA AAACCTGCTT TTCTGGTACG CGAGCAGCGT
CTGCTGGCCT CCGGCTCGGC CCTGCGCGAA GATACCGAGG CCTACAAAAG TACCTCGGCC
AGCGCTTCGG CAGCGCTTGA GCGCCGCCTT TCGCGCCTGT GGTGGGGCAG CCTGGGTGCT
GGCGGACAAA GCGGTTCCAT CAAGGAAAAT GACAGGACCG AACAGTTTTA CGCCTATGCA
GGTCCCAGAG CCAGCGTACG GCGCGACAGC CGCAACAATG TGCTCAACCC CACGCGCGGC
TCTGAGATCA TCCTCAAGGC CAATCCCAAT ACGGGCTTTT ATGGCGAAAG TTTTACGGTC
ATGGCCGGTT CTCTGGAGGC CAGCGGCTAC TATGCGCCCT TCCGCAAAGA CGGACGCCCC
GACGACAAGC TGGTACTGGC TGGCCGGGTA GAAGCCGGGG GCATGTCCGG CGCGGCCCTG
CACAATATTC CCGGCAGCCT GCGGTACTAT GCGGGTGGGG CCGGCTCTGT ACGCGGCTAC
GCCTACCAGT CCATCGGGCC TGAAGATAAA AACGGCGACC CCCTGGGCGG CCGGTCTTTT
CAGGTCATCA ACCTTGAGGC ACGCTACAAG ATCACCGACG ACGTGGGCCT TGTTCCGTTT
CTGGACGGCG GCATGGTCTA CCGGGATGAA GTTCCCCGCA TTATCGGCGA TATGGACTGG
GGCGCGGGCC TGGGTCTGCG TTACTACACG CCCATAGGAC CCCTGCGGCT GGATGTGGGT
TTTCCCCTGC AACCCAGGGA TGGCGACCCG CCGGTTCAAA TTTATGTGAG CATAGGGCAG
TCTTTCTGA
 
Protein sequence
MLLAKPAHTA YIAAMRAAPC KKPLNFFRSE RAVFFPLPEA NPGAGALRCL LLLLLTLCLC 
GCGLLKPKPD DAMSGQAQEQ ESLEAAWRGE PVPYSLRIKV EDGPSSLEGK MKSVSQLAQL
ANEPPDSTLA LERRARADVD TAVRLLHSQC YYEGSASFSF DEEARPLRVT LTLVAGPRYT
LGRADVVYEP SPDVPAPFKD RQREVGFWGL QTEPVPPPSF PPVLPGVAVG KPVVADTLLD
AVEALPEKLR TQGYPLAAVA QARYTLDPEK KQVNADISIN PGPPALMGGV DVTGNKGVNA
AYLQRLTPWI PGDEPWDTEL MDDYANHLRG LGLFRSVEVR PKEELLAGKD AADKSGVPLR
SKDGPAVLPI EVAVSELPFR SVGGSARYDT DTGLGVEGFW EHRNLFGNGE KLMVSAPIAT
QVQGIKAAFE KPAFLVREQR LLASGSALRE DTEAYKSTSA SASAALERRL SRLWWGSLGA
GGQSGSIKEN DRTEQFYAYA GPRASVRRDS RNNVLNPTRG SEIILKANPN TGFYGESFTV
MAGSLEASGY YAPFRKDGRP DDKLVLAGRV EAGGMSGAAL HNIPGSLRYY AGGAGSVRGY
AYQSIGPEDK NGDPLGGRSF QVINLEARYK ITDDVGLVPF LDGGMVYRDE VPRIIGDMDW
GAGLGLRYYT PIGPLRLDVG FPLQPRDGDP PVQIYVSIGQ SF