Gene Ddes_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0403 
Symbol 
ID7284067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp489894 
End bp490652 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content52% 
IMG OID643581193 
ProductMethyltransferase type 12 
Protein accessionYP_002478993 
Protein GI220903681 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGTT TTTATCAGAC AGAGTGGTTC GGAATCCCGT TTGATTCTTT TGCCAGCCTT 
TCTTTTTTTT CTTTGGCTGA CAAAGCTTTT TATGAAAAGT TTTATGATGC ATTTTTTAAC
AAATTTGCAG GCTACGATGC CTTGCCAGAA CCGTGGCAAG CCATAAAGCG GCAGTGCGCC
CAGGCCATTG CCGCACATAT ACCGCCAGTT GCCGCGCCCA AAATTCTTTC TGTGGGCTGT
GGGTCGGGCT TTGTGGAGCA TTGCCTGCTG CAGATGCGTC CCAATATACA AATGCATTGC
AATGACTCTT CGGACTCCCC CCTTCGGTGG ATCGCGCAAT CGTTGCCGGA AGAGCAGCTG
CATATCGGCC TCGTGCCGGA GTGTCTGCCG CAAGGGGCAA CATTTGATGT CATTTATTGT
AATGCATTTG AATACTGTCT CTCAAACAAG ACTCTGGTCA AACTTCTGTC TTCCCTGAAG
AGCTGGCTTG CACCTGGCGG CAGGCTGATA CTCATAAGCG CGTCTATTCT TGATCCCGCA
GATTCCCCGC ATACCGTCCG GCAATATGTG GATTACCTGC ACGATACCTG CTGCAACCTG
CTGGCGCATC TGCGCGGCGC AAAACCCCAG CAGTTTTGGG GGTGGGCCAG AACGCGGAAA
GAGCTGGAAG ACCTTATATT GCGGTGCGGC TACACTATGG ACGGGCAGCA GCAGATAGCG
CAGCTGGCTT CTTCATGGTT GTTCTGCACC AAGTGTTGA
 
Protein sequence
MIRFYQTEWF GIPFDSFASL SFFSLADKAF YEKFYDAFFN KFAGYDALPE PWQAIKRQCA 
QAIAAHIPPV AAPKILSVGC GSGFVEHCLL QMRPNIQMHC NDSSDSPLRW IAQSLPEEQL
HIGLVPECLP QGATFDVIYC NAFEYCLSNK TLVKLLSSLK SWLAPGGRLI LISASILDPA
DSPHTVRQYV DYLHDTCCNL LAHLRGAKPQ QFWGWARTRK ELEDLILRCG YTMDGQQQIA
QLASSWLFCT KC