Gene Ddes_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0400 
Symbol 
ID7284064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp487187 
End bp488014 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content54% 
IMG OID643581191 
Productglycosyl transferase family 2 
Protein accessionYP_002478991 
Protein GI220903679 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAA ATGCCGTTTC TCCTATGGTC GCCGTTATTA TCGCCACCCG GAACGCCGCG 
CAGGGGTTGG CCCTTACGCT GGGTTCCATT GCAGCCCAGA GCTGCAAAGA TGACATTGAG
GTCGTGGTAC AGGACAGCGA GTCCGTAGAC CATACGCTTG ACGTTGCCCG CAGTTATGCG
GCGCAACTTC CCCTATTGCG TGCGGCCTCG GCGCCCGACG ACGGCGTATA CGACGCCTGG
CTCAAGGTTA TTCCTAGCGT GCGCGCCCGA TGGATTCTTT TTTTGGGAGC GGGCGACACC
CTAGCGCACC CGGAAACCAT GCAGACCGTC ATATCCCAGC TGGAACAGTG CCCCGATGAT
AAATATTTTG CATTGGGTCA GGTTACCATC CTCAGCGCGG AAAGAGAGCT GCTACATTCT
ATCTCTAACG ATATCGACAA GATGGCTGCT GTTCTACCAT ATTACAACCC CATCTACCAT
GCTGGCGTTT TTACCAGCAG CAAATTTCTC AAGGCGCACC CCTTTGATGC TTCTTTTAAA
ATTCTGGGCG ATTATGATTT CTTTTGTCGG CACTGGGGCA ACGGCGAAAG AGCCTGGCAG
CTGCACTGCC TGATTGCCGA AGCTCCCTTG GGCGGGCTTT CCAATAGTCC CAAATTCCGG
ACATGCCATG ATGCGGAAAT CAAACGTATC CGCAAGGGGT ATTTTCCCCG CCAATACTGG
CGTTCGCGTC TTTACCAGGC TTGTGCGGGC TTGCTGCCAA AGGGGTGCCG CCAGTTGGTG
CCAGCGTCCG TAAAGCAGAT GTTGAAAAAA ATTTTAAAGT TGGCATAA
 
Protein sequence
MSQNAVSPMV AVIIATRNAA QGLALTLGSI AAQSCKDDIE VVVQDSESVD HTLDVARSYA 
AQLPLLRAAS APDDGVYDAW LKVIPSVRAR WILFLGAGDT LAHPETMQTV ISQLEQCPDD
KYFALGQVTI LSAERELLHS ISNDIDKMAA VLPYYNPIYH AGVFTSSKFL KAHPFDASFK
ILGDYDFFCR HWGNGERAWQ LHCLIAEAPL GGLSNSPKFR TCHDAEIKRI RKGYFPRQYW
RSRLYQACAG LLPKGCRQLV PASVKQMLKK ILKLA