Gene Ddes_0253 details

Gene Information

• Locus tag: Ddes_0253
• ID: 7283907
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
• Kingdom: Bacteria
• Replicon accession: NC_011883
• Strand: +
• Start bp: 296460
• End bp: 298313
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643581036
• Product: phage tail tape measure protein, TP901 family
• Protein accession: YP_002478846
• Protein GI: 220903534
• TIGRFAM ID: [TIGR01760] phage tail tape measure protein, TP901 family, core region

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCACAA AGCTGGAAAA ACTCTTTTTC GCCATCGGCG TGCAAGATGG CGCTTCAAGC 
AAGATAGCCA AGCTGCAGGC CAATATCTCA ACACTGGCTG ACAGGGCTAA AGGCGCATTC 
ATTGGCATGG GGTCTGCCGC TATGGGCTTG GCGGGAACGG CGCTCTCAAT CAAAGCCCTT 
GCCGGGCCAG CGATTGAACT CAATCACGCC CTGGGCGAAG TGGAAGCCCT GGGCGTTGAT 
TCCAAAGGGC TCAAGATTCT GCAAACCGAG GCCGGGCGCT TTGCCATGCA ATACGGCAAA 
AGCGCTACAG ATGTAATAAA ATCGTCAACG GCCATTCAAG AGCAGGTCGA CGGACTTACC 
GCCAAGGAGC TCGCAACGTT TACCACTGCC AGCAATGTGC TTGCTATGGC CAGCCGTTCC 
AGCGTGGACA GTATGACAGG GTATGTATCC AAGATGCATG GTCTGTTCGA GACTCAGGCT 
GGCAATATGG GGCAGGCCCG CTGGGCTGAA CAGATGGTCG GGCAAACCGC TTTCGTAACC 
AAGGCTTTCA AGGCCAAAGG GGAAGAAATT TCTGCAGGCT TTGACGCCCT GGGCAACAGG 
GCTGTCCGGG CGGGGATATC CGCGGGCGAA CAAATGGCGG TCATTGCCGC TGCCCAGCGA 
GACATGGGCG GCACGGCAGC AGGGGAGCAG TACAAGCTGC TGGTCGACAA GGCACGCACG 
GCAGGGCGCG CCCTGGGCGT GTCGTTCACC GACCAGCAGG GGCACATGCT CTCAATGGTT 
GATATTCTTG AACGTGTGCG GGCCAAATAT GGCGACACCC TCACCACTGC GCAGCAGGCC 
AGCCTTGGCA AGGCTCTGGG CGATGAAAAG GCGGGGGCCT TCCTCAACAC CCTGCTGTCC 
AAACAAGGCG AGCTCACCCG GGTTATCAAG GACGTTTCCA CAGTTACAAA CATGGACGGC 
GCCAGGGCAT CGGCCCGACA GACAACAGAT GCATTCCAAC GGTTCGGCGC GTCCTTGGAC 
TATGTGAAGA CTAACTTCAT GCAAAAGCTG CTGCCCACCC TTGAGCGATG GACGCATAAA 
GCCAGTGACC ACCTGGACAC CATCAACAAG TGGATCACCA AGTATCCCAA CGTGGCCCGC 
GTGATTGGCT ATGTGGTGCT TGCCCTGCTG TCACTGGCTG CGGTTGTGGC TGTTGGCACT 
ATGGCCTTCA ATCTGTTCAA GCTCGCAAGT ATGCCTGTTG TTGGGGCAAT CAAGGGCATC 
ACATCCGTAT TCAAATTGCT GACGGTGGCC ATACGGGCCA ACCCCATCGG CTTCCTTATC 
TGGGCGCTGA TTATGTGCGT GATGTATTGG GATGAAGTTT CGGCGAGTAT TGGAAAAGTG 
TGGGGGCTGT TACGCGGTTT CTTTGAATCC CTGGGGCCCA TCGGCGCACC CTTTGTGCTG 
CTAATGGATA CGCTGGCCGA GCGGTGGCGA TTGTTTACCG ACCTTTTTAA GGATTTTTCA 
TGGACAAAGC TGTTGCGGTT CGCCATTGCC TCAGTCCTCA CGCCTCTTGA GTTCTTTATA 
AATGCTATCG GCAAGCTGCT CTCGCACGTG CCCGGCATGA GTGAGAAGGC TGAAAAGCTT 
ATGAACTGGA AGGCCGCAAA TCTTGTCGAT ATGCCGTCAA CCCCGGAAGA TTTGGAAGTA 
GAAAGCCTCA AGCAGTCAAA AACCCTGCAG GTGCAGCAAG GGGGCGTCAT GCCGTCTGGC 
GGCAGCTCGT CAACCATGAA CAACAATGGC CGCAGCGTAA CCATTGGCGA GCAGCACATA 
CACGTCGAAA ACGCCACCGA TATGAATGAT TTTTGGACGA TGGGGCTTGG GTAA 

 

Protein sequence

MATKLEKLFF AIGVQDGASS KIAKLQANIS TLADRAKGAF IGMGSAAMGL AGTALSIKAL 
AGPAIELNHA LGEVEALGVD SKGLKILQTE AGRFAMQYGK SATDVIKSST AIQEQVDGLT 
AKELATFTTA SNVLAMASRS SVDSMTGYVS KMHGLFETQA GNMGQARWAE QMVGQTAFVT 
KAFKAKGEEI SAGFDALGNR AVRAGISAGE QMAVIAAAQR DMGGTAAGEQ YKLLVDKART 
AGRALGVSFT DQQGHMLSMV DILERVRAKY GDTLTTAQQA SLGKALGDEK AGAFLNTLLS 
KQGELTRVIK DVSTVTNMDG ARASARQTTD AFQRFGASLD YVKTNFMQKL LPTLERWTHK 
ASDHLDTINK WITKYPNVAR VIGYVVLALL SLAAVVAVGT MAFNLFKLAS MPVVGAIKGI 
TSVFKLLTVA IRANPIGFLI WALIMCVMYW DEVSASIGKV WGLLRGFFES LGPIGAPFVL 
LMDTLAERWR LFTDLFKDFS WTKLLRFAIA SVLTPLEFFI NAIGKLLSHV PGMSEKAEKL 
MNWKAANLVD MPSTPEDLEV ESLKQSKTLQ VQQGGVMPSG GSSSTMNNNG RSVTIGEQHI 
HVENATDMND FWTMGLG