Gene Ddes_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0218 
Symbol 
ID7283872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp269497 
End bp270855 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content55% 
IMG OID643581001 
Productaminotransferase class-III 
Protein accessionYP_002478811 
Protein GI220903499 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCAA AGAACACAAA TGAATATGTC AACGGGGATA TAAAAAACGT ATGGCACCAT 
CTGATGCTGC ATCAGGGCAA TGCCCCCATG ATTGCGGTAG AGGGCAAGGG CCTGTACCTC
AAGGATCTTA ACGGCAAGGA ATATCTGGAT GCCACCTCCG GCGGCGTCTG GTGCGTCAAT
GTGGGTTACG GCCGTGACCG TATCGCCAAT GCCGCCGCCG AGCAGATGAA AAAACTGCCT
TTTTATGCGG CCAGTTGCGG CTCCCAGCCT GCCATTGATT TTTCTGAAAA GCTGCTTTCG
CACATGCCGG GGCTTTCCCG CGTGTATATT TCCAGCAGTG GCTCCGAGGC CAACGAAAAG
GCCTTCAAGA TGGTGCGCCA GATTTCCCAG CTCAAGCACG GCGGCAAAAA ATATAAAATC
ATTTACCGTG ACCGCGATTA CCACGGCACC ACCATCAGCA CCCTGAGCGC TTGCGGCCAG
GAAGAGCGCC GTGAGCAGTA TGGTCCCTTT ACCCCCGGTT TTGTGGAGTT TCCCGCTTGT
CTGGCCTATC GTTCCCCCTA TCCTGAAGGC ACGAAAAACC TGGGCGAAAA GTTTGCCCGC
GAGCTGGAAG CCGTGGTTCT GAAGGAAGGT CCCGACACCG TGGGCGCTGT TATTCTGGAG
CCGATCACGG CTGGCGGCGG CATCATTGTG CCTCCGGAAG GCTACTATGA GACCATCTCC
GAGATATGCA AGAAATACGG CATCCTGATC ATTATGGATG AAGTGGTCTG CGGTCTTGGC
AGAACGGGCA AATGGTTCGG CTACCAGCAC TTCAACATCC AGCCCGACAT TGTGACCATG
GCCAAGGGTG TTGCCAGCGC CTACATGCCC ATTTCCTGCA CCGTGACCAC CGAAGAAGTG
TTTGCGGCCC TGCAGGATAC CACCGACAAA CTCTCGTATT TCCGCGATAT CAGTACCTTC
GGTGGCTGCC TTGCCGCCCC GGCTGCGGCT CTTGAAAACA TCAAGATCAT TGAAGAAGAA
AGCCTGCTGG ACAATGTTGT AGCCATGGGC GACTACCTGC AGCAGGGGCT TCAGGAGCTG
CTTTCGCACA GCAATGTGGG CGATGTACGC GGCAAAGGTC TTTTGCAGGG CATTGAATTT
GTTGCTGACA AGGCTTCGAA AAAGCCCCTT GAAGAAGAAA AGGTCATCGC CGTCTGCGGA
GCCATGGCCA AGCGCGGCGT GCTTGTGGGC AGAACAAACC GCAGCTTTGT GGGCCGAAAC
AATATCGTCA ATGTGGCTCC GGCCTATATT GTGACCAAGG ATCAGATTGA TATCATTCTC
AAGGCGCTGC GCGAGTCCAT AACCGAAGTT CTGGGCTAG
 
Protein sequence
MSAKNTNEYV NGDIKNVWHH LMLHQGNAPM IAVEGKGLYL KDLNGKEYLD ATSGGVWCVN 
VGYGRDRIAN AAAEQMKKLP FYAASCGSQP AIDFSEKLLS HMPGLSRVYI SSSGSEANEK
AFKMVRQISQ LKHGGKKYKI IYRDRDYHGT TISTLSACGQ EERREQYGPF TPGFVEFPAC
LAYRSPYPEG TKNLGEKFAR ELEAVVLKEG PDTVGAVILE PITAGGGIIV PPEGYYETIS
EICKKYGILI IMDEVVCGLG RTGKWFGYQH FNIQPDIVTM AKGVASAYMP ISCTVTTEEV
FAALQDTTDK LSYFRDISTF GGCLAAPAAA LENIKIIEEE SLLDNVVAMG DYLQQGLQEL
LSHSNVGDVR GKGLLQGIEF VADKASKKPL EEEKVIAVCG AMAKRGVLVG RTNRSFVGRN
NIVNVAPAYI VTKDQIDIIL KALRESITEV LG