Gene Ddes_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0182 
Symbol 
ID7283836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp228936 
End bp230141 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID643580968 
ProductRadical SAM domain protein 
Protein accessionYP_002478778 
Protein GI220903466 
COG category[B] Chromatin structure and dynamics
[K] Transcription 
COG ID[COG1243] Histone acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.534223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGG TATCTGCCCG AATTTTTTCT TTAACCCTGC CCTGGGTTCT GCCTGCGGCG 
CAGGCTTGTG CGCTCGTGCC GGTATTTCTT CCTTTCAGGG GTTGCCCGGT GCGTTGCGTC
TTTTGTGCGC AGGATGTGCA GACAGGTTCC GTCTCTGCGG CGTGCCCGGC AGAGGCAGTG
TCCGGCACTG CTTTTGCGCC GCGGACGGGC ACGGCCCCGG CCGCTGCTGC GGGGCGCGCC
TCCCTGCCGT CGCCCCTGCC TCCGCTTCCG GTCCAGCCGC TTGATGTCCT GCTGCATGAG
ACGCGGGGCA ATCTTGAGCG CCGCCATACC CTCGGCCTGC CCCCCGCGGA ACTGGCTTTT
TACGGTGGTA CATTTACTGC CATGCCTGAT GGCGATCAGG CTGCCTGCCT TGATCTGGCG
GGCCTGGCGC TTGAGCGGGG CTGGATACGT TCCTTCCGCT GCTCCACCCG GCCGGATTGC
GTGACCGCGC CGGTACTTGA ACGCCTGCGC GCGGCGGGTT GCCGTTGTGT GGAGCTGGGG
GTGCAGAGTT TTTCCGATGC GGCGCTGGCC GCATCGTCGC GTGGGTATGA CGGAGCTACG
GCCCTGCGCG CCTGTGCCCA TGTGAAGGAT GCGGGGCTGG CGCTGGGGGT TCAGCTTTTG
CCGGGCATGC CGGGGCATGC CCCTGCCGAT TTTCTGGCTG ACGTGCCACA GGCCCTGCGC
GCCGGAGCGG ACATGCTGCG CTTCTACCCC TGTCTGGTGC TCGAAGGTAC GGCCCTTGCT
CGTATGTGGC GGCAGGGGAC ATACAGCCCG TGGCCGCTTG AGGCGACGCT GGACCTGCTG
GCGCAGGGCT GGCTGATGGC TCAGGCTGCC CATGTGCCTG TGATACGTAT GGGACTCGCC
CCTGAAGCCG CTCTGGACGG AGCTGTGCTG GCCGGGCCTG TTGACCGGTC TTTGGGCAGC
CGCGTTATGG GGCGCGCCCT GCTGCTCGCC GTACGCCGTG CCGTGGAAGC GGCGGGTGAA
ACTTCCGGGG CGTCCTGCGT TCCCGTTCTT TCGGAGCTGC GTCTGCCGGG AGCCTGCCAG
GGATACATCT GGGGAACGCG GGGCGAGTTG CGCCCTGCCT GGGCCGGCCT GGGGCTTGAG
CCGAAAAATG CGCGTTTTGA TGCCGTCTGC GGGCAGACCC TCTTTTTGAC CCTCACCTGT
TCCTGA
 
Protein sequence
MKTVSARIFS LTLPWVLPAA QACALVPVFL PFRGCPVRCV FCAQDVQTGS VSAACPAEAV 
SGTAFAPRTG TAPAAAAGRA SLPSPLPPLP VQPLDVLLHE TRGNLERRHT LGLPPAELAF
YGGTFTAMPD GDQAACLDLA GLALERGWIR SFRCSTRPDC VTAPVLERLR AAGCRCVELG
VQSFSDAALA ASSRGYDGAT ALRACAHVKD AGLALGVQLL PGMPGHAPAD FLADVPQALR
AGADMLRFYP CLVLEGTALA RMWRQGTYSP WPLEATLDLL AQGWLMAQAA HVPVIRMGLA
PEAALDGAVL AGPVDRSLGS RVMGRALLLA VRRAVEAAGE TSGASCVPVL SELRLPGACQ
GYIWGTRGEL RPAWAGLGLE PKNARFDAVC GQTLFLTLTC S