Gene Ddes_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0128 
Symbol 
ID7283782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp164931 
End bp165584 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID643580916 
ProductdTMP kinase 
Protein accessionYP_002478726 
Protein GI220903414 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.630862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTCA CTTTTGAAGG TATAGAAGGC GCGGGAAAAT CCACGGCCAT TGACTATCTG 
TCAGACTACC TGCAAGCGCG CGGCCATGAC CCCGTACTGA CCAGAGAGCC TGGCGGCAGT 
GCCCTTGGGC GTCGCCTGCG CGCCCTGCTG CTGGATGTGC GCACCGGCGG GCTGGCCAGC 
CGGGCCGAAC TGTTCCTGTT TCTGGCCGAC CGCGCCCAGC ATGTGACAGA GGTCATCCGC 
CCCGCCCTTG AGGCCGGGCA GGTAGTGCTC TGCGACCGCT TCACGGACTC TACCCTGGCC 
TATCAGGGCT ACGGGCGCGG GCTGGACACG GAATACCTGC GCAGCCTCAA TACAGCGGCC 
ACCGGCGGGC TTGAGCCTGA CCTCACCCTG TTGCTGGACC TGCCCGTGCG CTGCGGACTG 
GAACGCGCCG GTGAGCGCAA CCGCTCCGCC GGCATGGTCA TTGCCGAGGG GCGTTTTGAC 
AGTGAAAGCC TGGACTTTCA TGAGCGTGTA CGCCGGGGTT ACCGCGCCCT GGCTGAGGAA 
GAACCGGAAC GCTTCGCCAT TATTGACGCC TCACAGCCTC CCGAAGACGT GGTGCTGCAA 
TGCCGCTCGG CCATTGAGGC CTATCTGCGC CGGCGGGGAC GGGGCCTCGA CTGA
 
Protein sequence
MFVTFEGIEG AGKSTAIDYL SDYLQARGHD PVLTREPGGS ALGRRLRALL LDVRTGGLAS 
RAELFLFLAD RAQHVTEVIR PALEAGQVVL CDRFTDSTLA YQGYGRGLDT EYLRSLNTAA 
TGGLEPDLTL LLDLPVRCGL ERAGERNRSA GMVIAEGRFD SESLDFHERV RRGYRALAEE 
EPERFAIIDA SQPPEDVVLQ CRSAIEAYLR RRGRGLD