Gene Cyan7425_5404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_5404 
Symbol 
ID7280365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011880 
Strand
Start bp133937 
End bp134515 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content45% 
IMG OID643580549 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002478362 
Protein GI219883200 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0587042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTG ACGATCGGCG AATTGAAGTG ACTCAAGCGG CATGGCGGGT GATTATCCGT 
GAAGGATTGG ATCGCACCAG TATGCGGGCG ATCGCGCAAG AACTGGGTTC TTCAACTGGG
GTTATCACTC ACTACTTCCG AGATAAAGAA GAGCTGATTC TATTTGCCCT AGAACAAGTA
TTTGAAAACG CTCTAGAGCA CATGCAAGAG GTTGCCAAGG GGCGACAAGG AATTGACAGA
TTAGAACAGA TGATCTTTAC AGCGCTACCT TTAGAGGAAA TTGACAAAGC TGATTGGAAA
GTTTGGATTG CTTTTTTGGG GTATTCGATT GGACGCAAAT ACCTGATCCA GAAACACCGA
AGACGCTATG AGCGCTTACG GCAGATCCTT CACCAAGAGT TCACTGATTT ACAAGCAGCT
AAGTTGATTC GAGTTGATCT TGATCTAAAC CTCGAAGTTA ATGCACTCAT CGCTCTAGTA
GATGGCATTG CCACTGGAGC TGTCATCTGC CCTGAACAGT TCTCAGCAGA ACAACAACAA
TATCTTGTGC ATCGACATAT TAATGCTTTA TTAGCATAA
 
Protein sequence
MSSDDRRIEV TQAAWRVIIR EGLDRTSMRA IAQELGSSTG VITHYFRDKE ELILFALEQV 
FENALEHMQE VAKGRQGIDR LEQMIFTALP LEEIDKADWK VWIAFLGYSI GRKYLIQKHR
RRYERLRQIL HQEFTDLQAA KLIRVDLDLN LEVNALIALV DGIATGAVIC PEQFSAEQQQ
YLVHRHINAL LA