Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_5390 |
Symbol | |
ID | 7280351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011880 |
Strand | + |
Start bp | 110909 |
End bp | 115906 |
Gene Length | 4998 bp |
Protein Length | 1665 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643580535 |
Product | conjugative relaxase domain protein |
Protein accession | YP_002478348 |
Protein GI | 219883186 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAAGTC TCCACACAAT TACGTCAGGT CATCAAGAAA AAGAAGACTA TTACACCCAG GATGAATCGC TCTGCGATGG GCAAGCGGAT TACTACGGTC AGTCAGCCCA GTCAACCACG GAGTCTTCTG TTCAATCCCT TACTCAAGCC CTCTGGTACG GCAAAGGTGC AGCTCGTCTG GGATTGGTCG GGATCGTCCA GCGGCAGGAC TTCCAGTCCG TGTTTTATGG CGACCAACCG GGCGGCCAGG AACGAATTCG GGGTGAGCGC CCTAACCCAG ACACAAAGGA ACGGTTGGCT CACGACCTCA CCCTCTCAGC CCCTAAATCC GTTTCCATGA CCCTGCACCT GGGTGGAGAC GAACGGCTTT TTCAAGCTCA TTTAGAAGCC GTTCAGGAAA CCTTAGACCT GGTGGAATCA AGGTATGCCC AGACTCGAGT TCAGATCGAC GGTGAACGTC GAGTGATGCG GACGGGTCAT CTCATTGCCG CGATCCTCCC CCACCACACT TCTCGAGAAG GAGACCTGCA ACTCCACTGC CACTGTGTGC TCATGAACGG AACGTTCTGC CCGGATGGGA ACTGGCGATC GCTTTGGCAC GAGGGGATGG TGAATGCCGA ATGGTTGGGC AGTTACTACC GGCTGCGTCT GGCCCAAAAG GTGCAAGACC TCGGATACGC CATTGATGAA ACCCGACTGG AGCAGGGGGG AGCATTTGAG ATTCAGGGAT ATAGTCGGGA GGCGATCGAA GCATTCAGTA AGCGATCCAG GCAGATTGTG GCGTATCTGG AACAGCACAG ACAATGCGTT AATTCGGCCA CGCGAGATGG AGCCGTTCTG ACAACCCGCA AAGCAAAACA GATGGAAGGA ACCCTGGAGG ACTATCAGGC TCGCTGGCGG CTTGAAGCGA ACGTTTTGGG AATTAATGCT GTCCTCCCTC AAGCCCAACC TGTAACGCTC TATGGCTATG GGACCGCCCG GGAGGAATTG GCCAGCGCCA TTCGACACTT GTCAGAACGA TCCGTCAGCT TCAGCCGGGA AGACCTTTAT AGCTCTGTCT TTGACCGCAT TCAGGCTTTT GACATTGCTC AGCTAGACGC AGTGATCGCT GAGCAGAAAG ACCTGATTCC GGTTCAGGGC GGACGCTTTA CCACAGTTAC TGCCCTGGAG CGAGAAATTA CGACCCTTCG GGACTGGATG CAGGGACAAG GAAAGACCAC TCCCCTGATG GACGAAACCA CTGCCCAGGC ATTACTTGAG CGGTCGGCTC TGAATTCTGG ACAGGCCACC GCGATCGCCG GAATCGTCAG CGCAGGGGAT CAGCACCTGA TCCTGCACGG CTTATCGGGC GTTGGTAAAA CAACTGCACT GCGAGAATTG AAGCGGTTGA TCCAGGAATC GGATTCAAAA CCGGACATCA GGGGGTATAG CCCGACGATC GCTGCTGCTG CAACCCTTGC CCAGTCACTC CAGATCTCAA CCAGCACTGT TGAAAGTCTG GTGCTCAAAC CTCCTGAACC CCTGGCTGAT CAACTCTGGA TCATTGACGA AGCTGGCATG ATCAGTGCCC GGCAGATGGC CATCATTCTG AAGAAAGCCA ATGCTGTTGG GGCAAGGCTG CTCCTGGTGG GCGATCCTCG ACAGAACCCT GCCATTGAAG CTGGGAGTCC GATGCGGAGC TTAATTCAGC ACGGGGCCAC GACGTTTAGC CTTCGGGAGA TTATCCGCCA GCAAAATGCT GTCCAGCGAC GGGCCGTCGA ACTGATGGCT ACAGGACATC CGGTCCATGC GCTCAGTCTG CTCACTGAAC ACGGGTATGT GCAGGAGATC AGCGATCCCC AAGCACGGAG TCAGGCGATC GCCCACCAGT GGTTAACCCT TTCAGATAGT GAGCGGCAAA ACACGCTCAT TGTCACAGGC ACAAACGCGG AACGACGGGC AATCCATCAG CAGTTGCGGC GGGGACTGCG GGATGAGGAA GGACTGGGGG AGGATCAGCT GTTCCGCCAA CTGATTAACC GCCAGTTGAC CACCGAGCAG AAATTGCGGT GGGAGAACTA TCGGGTTGGA GATTATATCC GGTTGCACCG GAACTATGAA AGTACGCTCC TGGGGAAAGG TCGCCTCTAT CAAGTCGTTG GAATACGGGA CAGGCAGTTA CTGGTTGAAA GTGAAGGTGG CCGGCTCCTC TGGTTTGACC CAGCCCGGTA TCGAGATAAG GAGGTGTTTA AGACCGGTGA AATCGCGATC GCCCCTGGAG AGCAGCTGCG CTGGACATTG ACCGATCGCA AGACAGGGCA GATCAATGGC TCTCAGGTCT CAGTCAGGGA GATCAACGAC GATCATCTAA CCGTTGTAGA TGACCAGGGA CAGGAATGGA GGATTAATGG TCGGTTACCT CTGACCCTGG ACTATGCTCA TGTCACCACA GCTTATTCTG CCCAGGGACT GACTGCTGAG CGAGTGATTG TGTCTGCAAC GAACAATCCA ACCTCTGCCC AAGAACCCTT TTATGTCAAG ATTTCTCGCC AGGTTAGAGA GCTTCAAATT TATGTTGAAG ACCTGGAGGG ATTGCGCGAG TGGGTGGGGC GCAGTGTCGC CCAGATGAAT CCTTTAGAAC TTATCGGAGG GCATGATGTC AAACGAGAAC GCCAATTTGG AGCAACTGGT GCTCACGATG AACCAGAAGC TGGACAGCCT GATCGCCCAG AACAGAATTT ATCAGGAGGA GAACACAGCC TTAAAGTCGA TGCTGGACTT GAGCCTCAGT ACCGTCCCCC TCACCATGCG ACAGGAACTT CAGACGTTTC TAGACCAGTT CCGCGAGGCT CTGGAGAAGC GGAAGCCTTC GGAGATGTCC GATGCGATTC ATCAACTGGC TTTGGCAGTG AAGGGATTGA AGGACCAGAT CGACCGTTCA GCATTGACCG ATACCCAGAT CAGCTTGTCC CTCAACCAGA CCCTAGCCGA AATCAATGCG TTAACCCATT GCTTATCCAA CAGCGATTTG ATCAAATTGC TCAGCAAATG GGAGCAGTCT TCCCCGGAAA CCCTGAAACT TCCTTAAACG CTACCTTTGG GCAATCTCAT TACCGGGGCT TGGCAGAGTT CGCTCAGGAA CTGGAGTATC TCGGTGAAGA AGACCTGTGC CAGACCCTGC AAGACATTAC CCACGCCCTG GTGGAGGTAG AACGCTGTCT GGAACGATCG CTGCAACAGG TCAAACTGGA CACGATCACT GATGCTCTCC AGTCGTGGCG CTCAGAACAA GCTCTCTCGG AAGCGATCGC CCAAATCGCG ACTGTCCAGG CTCAGGCAGA AGAGCCAGAT TCTTTAATCC TGGGAACGGT CCTTCAGGAG GTGAGGAAAC TTCCCTACCG TCGGGAAGAG GTCGATCACC TGGTTGAACG GGTCGAGGAG TGGCAGGCCG AGCAGGATCT CTCTGCTGTT TTGGAGCAAC TGGGCAGGAC GATCAATGAA CTCAAACCGT CCTTCTTTTC ACCGGGCTAC CAGGCGATGG CTGAACTGGC TGAGGCCGTG GGCGATCGTC CTGCCGAAGC TGTCATTAGG GAGCACCTGC AAGCCCTTCA GGACGCTACT CTACAGATCC AGCAGAGGTT ACTCCAGAAT CCAGGATTGG AGCAACTGGC GGTTGCTGTG AGATCTTTGA GAGAAAACCC TGTTATTGCC GAGGGAGCTG CAGCAGAGCC ACTCCAGCAG GTGGCTGAAC ACCTGACAGC CTATGGACTG AATCCCACTC CACCACCGCA GAAACTCCAA CCCTTCTGGC AACCCCAGTA CCTGGAGGAG CCACCCGCAG GCTTTGACCC CGTCCACTGG CAGGAATTCC AACGCAGTGC GATCCACCCC GACCTAATTG TGGCTAACGC TGAGAGTATC GATGGCTGGA GAGTGTATGA ACGATTGCTA TCCGAGAAAT TGGCAGAAAT GGGCTCAGGG CAATACGTCA CCGCTGCCAT GGCCAGGGAA ATGCGACGTT ACGAGCAGGT TGCTGAGGGA GGCTGGTGGG GCAAGGCTGG AATTGATCCT CAGTCACTGC CAGGTCTGCA ACCCGGTGAG CAACCTACTC TCAGCACCTG GGGTTGTTTC AAACCTGATC ATCCCCGCAT GGATGTCAGC AAGAGCGATC GCACAGGGCA ACCCAAAACC ATCAAGTATG AGCATCCCGT TGGCGTCCAG CGAGGTCTTT ACCTACCGAT TGTTCCGGAT AGCTTGGCAA AGCGAATTTA TCAGAAATAT CAGATTCAGC CCACCTCAAC TGAGCAGCAA AGCGGCTTCT GGTTTGTCGT GCTGCACTAT AACCTGCCGA TCACAATTAC AGAGGGGGTG AAGAAAACCT GGGCGAGCCT CAGTCAGGGG GAGGTGACGA TCGGGGTCTC CGGCGTAAAT GGTCTTTACC GCACAACGGA TGTAGGGGGT CATCGGCTTC CCCAGCGGCA ACTGCACCCG GACATTGCCA TTTTTGTCAC GCCAGGGCGG GAGTTCCGGT TTGCCTACGA CCACGACACT AAACCTGCCA CCGTCTACAA TGTACAGCGC GATCGCGTGC GGGGGATTGA GCTACTGGAG GCGCGGGGCT GTCTCTGCAA GATTGTGCAA TGGTCAGGGG ATAAGGGGCT GGATGATCTG ATTGCTCACC AGGGGGCGAA CGCTTACACA AGGGCACAAC TTCAGGCCAT TTCGGCTGAG CCAGAGAAAC AAAATTACTA TCGTAGTCAG TACCGGGTCA TCGCTCGACA GGTGCAGCAG GAGTTGGGGT CACTCACGGC CGAACAACTG GACAGGGAAG TGTACCGCCG GGCGATCACT CGGGGAGATT TGCTGGATGG AGAACGCTTC CTTCGATTCA GAGAGGATGA ACAGGCAGAA ATTTCGGCAC AACCCGTTCG GCAAAAGCCT GAAATCGGGG TCAAAACACC GAAGGAATCG ACTCAATTTC ACCAGCATCA AGTTCAGGAG AATGATTTTG AGCTTTAA
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Protein sequence | MRSLHTITSG HQEKEDYYTQ DESLCDGQAD YYGQSAQSTT ESSVQSLTQA LWYGKGAARL GLVGIVQRQD FQSVFYGDQP GGQERIRGER PNPDTKERLA HDLTLSAPKS VSMTLHLGGD ERLFQAHLEA VQETLDLVES RYAQTRVQID GERRVMRTGH LIAAILPHHT SREGDLQLHC HCVLMNGTFC PDGNWRSLWH EGMVNAEWLG SYYRLRLAQK VQDLGYAIDE TRLEQGGAFE IQGYSREAIE AFSKRSRQIV AYLEQHRQCV NSATRDGAVL TTRKAKQMEG TLEDYQARWR LEANVLGINA VLPQAQPVTL YGYGTAREEL ASAIRHLSER SVSFSREDLY SSVFDRIQAF DIAQLDAVIA EQKDLIPVQG GRFTTVTALE REITTLRDWM QGQGKTTPLM DETTAQALLE RSALNSGQAT AIAGIVSAGD QHLILHGLSG VGKTTALREL KRLIQESDSK PDIRGYSPTI AAAATLAQSL QISTSTVESL VLKPPEPLAD QLWIIDEAGM ISARQMAIIL KKANAVGARL LLVGDPRQNP AIEAGSPMRS LIQHGATTFS LREIIRQQNA VQRRAVELMA TGHPVHALSL LTEHGYVQEI SDPQARSQAI AHQWLTLSDS ERQNTLIVTG TNAERRAIHQ QLRRGLRDEE GLGEDQLFRQ LINRQLTTEQ KLRWENYRVG DYIRLHRNYE STLLGKGRLY QVVGIRDRQL LVESEGGRLL WFDPARYRDK EVFKTGEIAI APGEQLRWTL TDRKTGQING SQVSVREIND DHLTVVDDQG QEWRINGRLP LTLDYAHVTT AYSAQGLTAE RVIVSATNNP TSAQEPFYVK ISRQVRELQI YVEDLEGLRE WVGRSVAQMN PLELIGGHDV KRERQFGATG AHDEPEAGQP DRPEQNLSGG EHSLKVDAGL EPQYRPPHHA TGTSDVSRPV PRGSGEAEAF GDVRCDSSTG FGSEGIEGPD RPFSIDRYPD QLVPQPDPSR NQCVNPLLIQ QRFDQIAQQM GAVFPGNPET SLNATFGQSH YRGLAEFAQE LEYLGEEDLC QTLQDITHAL VEVERCLERS LQQVKLDTIT DALQSWRSEQ ALSEAIAQIA TVQAQAEEPD SLILGTVLQE VRKLPYRREE VDHLVERVEE WQAEQDLSAV LEQLGRTINE LKPSFFSPGY QAMAELAEAV GDRPAEAVIR EHLQALQDAT LQIQQRLLQN PGLEQLAVAV RSLRENPVIA EGAAAEPLQQ VAEHLTAYGL NPTPPPQKLQ PFWQPQYLEE PPAGFDPVHW QEFQRSAIHP DLIVANAESI DGWRVYERLL SEKLAEMGSG QYVTAAMARE MRRYEQVAEG GWWGKAGIDP QSLPGLQPGE QPTLSTWGCF KPDHPRMDVS KSDRTGQPKT IKYEHPVGVQ RGLYLPIVPD SLAKRIYQKY QIQPTSTEQQ SGFWFVVLHY NLPITITEGV KKTWASLSQG EVTIGVSGVN GLYRTTDVGG HRLPQRQLHP DIAIFVTPGR EFRFAYDHDT KPATVYNVQR DRVRGIELLE ARGCLCKIVQ WSGDKGLDDL IAHQGANAYT RAQLQAISAE PEKQNYYRSQ YRVIARQVQQ ELGSLTAEQL DREVYRRAIT RGDLLDGERF LRFREDEQAE ISAQPVRQKP EIGVKTPKES TQFHQHQVQE NDFEL
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