| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2764 |
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| Symbol | |
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| ID | 7270874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2893284 |
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| End bp | 2895065 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643571352 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002467745 |
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| Protein GI | 219853313 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.359165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.516163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCACA CCTCGACTAC GAACCAGGAA GTGTTCGGCA GGATCATTGA CCTGCTTCAG
CAGTACGCAC CACGGGGGAT GCCGATTCTG AATATCGCCC GGGAACTCGA TATCGACCGA
AAAACAGCTG CTAAATACCT CGAACTCCTC ACACTGAGCG GCGATGTCAG CGTGGAACGG
TTCGGACAGA AGAAGTTCTA CCAGCCGTCA CGGCGCATCC CACTGCCGGA GATCTTCGAC
CACCTCCACC ACGCGATCGT GATCCTGGAT AGCGACCTGC AGATCCTCAT GGTGAATACG
AGTTTCATCG TCACCCTCGG CATCCATCCT GGCCACAATC TTGTCGGCGT CCCGCTCTTT
GAACTCGATC TTCCGATCTT CTCCGAACTC TCAGTCCGGC GGAACATCGA ACGGGTACAG
CACTCCCAAA CGCATCTTAC CGAGATGCAG ATGATCGACG AGCGGACGAA TCAGGTCTAT
CTCGTCGACT TCGCGCCGAT CAGCTCGCAG ACCAGCCGCC CAGGGATCAT GGTCAGCCTC
AGGGACATCA CCGCGCTGAG GAAGGCCGAG ACCGATCTGG AGGACTCGGA GAAGAAGATC
GCGACTCTCT TCGAGTCGGT TCCAAGCGGG ATCATCATCT TCTCTGCCAA CGGGACTATC
CTGAACGCGA ACCGCGCTAC GTTGCGGGTT CTCGGGCTGC GCACCCTCGC CGAACTGAAA
AACGCGAACG TCTTCGACCT CGCCTGTCGC CGGGAGAAGA TGGAGTCACT GATCCAGCTG
GGGCAGGAGG CTGAGATCGA GCTTGCATGC GACTTCGATC GGTTGCTGCA AGAACGGCAG
ATCCTGGGCA CAAAGCATGG CATTGCCTTC TTTGATGTGG CCTTCACCCC GATCCTGTCT
GGTACCCGAG GTCAGCCGAA CGAGTATGCC ATCCTCTTCA AGGACATCAC AGCAAAGAGG
CGTGCAGAAA AGGAGTTGAA AGAGCGGTAC AGAGGGATCT CCAGCAATCT TCCGGGGGTT
GCGTACCAGT TCTATGCGAG AGATACAGGA GAATGGGGAG TGTATTACGT CGACGAACGT
TCGATGGAGA TCTACGGTGT TCCCATCGCA CCCCTGGATA ACTGGTTCCA GCGGTTCGGT
GCCTGCATCG CACCCGAAGA CCAGGCGCGA TGGTTCGAAT CGATCTGGGA TGTCATTGCG
AGGGTGGCAC CATGGGACTT CGAGGGCCGT TTCATCAGAT CGACGGGGGA GGAGATGTTC
ATTCGGGGTG TCTCGCAACC TGTCAGGTTG AAGAACGAGA CAGTCTGGAA CGGGATATTC
TTCAATATCA CCAAACGTAA ACAGGCAGAG AAGGCATTGC AGACGAGTAT CTTTCAGGAG
ACACGGTACC GCTCCTTCTT CGAGGATACC TGTAATGGTG TCCTGATCTA CGAGCCGATC
GAAGGGGGGA ACGATTATAT TATCAAGGAC GTCAACAGGG CAACGGCGAT CCTCCTCAGA
ACGGAGAAGC AGGACCTGAT CGGGAAGAGA CTCTTTGTGG AGTTTCCCGA CCTACCAGAT
CCCTCGGTGC GTGAGATGTT GATCCGGGTG CTGACCACAG AACAGCCGGA GTTCGTCCCG
CCGCTACGGT ACCGGAACCG TGAGGACTTC CCCTGGATCT CGCACTACGT CTTCAAGCTC
CCGTCGGGTG AACTCGCCTC CTTCATGATC GACGTCTCTG GAATGCTGGA GGACATGACG
GGGTCATCAG ACCCCATGGT GGATACCCGC TCCGACCTGT GA
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| Protein sequence | MTHTSTTNQE VFGRIIDLLQ QYAPRGMPIL NIARELDIDR KTAAKYLELL TLSGDVSVER
FGQKKFYQPS RRIPLPEIFD HLHHAIVILD SDLQILMVNT SFIVTLGIHP GHNLVGVPLF
ELDLPIFSEL SVRRNIERVQ HSQTHLTEMQ MIDERTNQVY LVDFAPISSQ TSRPGIMVSL
RDITALRKAE TDLEDSEKKI ATLFESVPSG IIIFSANGTI LNANRATLRV LGLRTLAELK
NANVFDLACR REKMESLIQL GQEAEIELAC DFDRLLQERQ ILGTKHGIAF FDVAFTPILS
GTRGQPNEYA ILFKDITAKR RAEKELKERY RGISSNLPGV AYQFYARDTG EWGVYYVDER
SMEIYGVPIA PLDNWFQRFG ACIAPEDQAR WFESIWDVIA RVAPWDFEGR FIRSTGEEMF
IRGVSQPVRL KNETVWNGIF FNITKRKQAE KALQTSIFQE TRYRSFFEDT CNGVLIYEPI
EGGNDYIIKD VNRATAILLR TEKQDLIGKR LFVEFPDLPD PSVREMLIRV LTTEQPEFVP
PLRYRNREDF PWISHYVFKL PSGELASFMI DVSGMLEDMT GSSDPMVDTR SDL
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