| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2694 |
|---|
| Symbol | |
|---|
| ID | 7272516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2823917 |
|---|
| End bp | 2825833 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643571285 |
|---|
| Product | ATP-dependent protease Lon |
|---|
| Protein accession | YP_002467681 |
|---|
| Protein GI | 219853249 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1067] Predicted ATP-dependent protease |
|---|
| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGTA CTGTAAATGA GGAGCCAACG CACGAGGATA CCATTTTAGA GAACGTGCAG
GTGGAGACCT CATCCGAGAT TGAGGTACCG GCGCATCTGA TCGATCAGGT GATCGGTCAG
GAGCATGCGG TTGAGGTGAT CAGGAAGGCG GCGATACAAC GCCGTCATGT GATGATGATC
GGTAGCCCGG GGACCGGGAA GTCGATGCTT GCAAAAGCAA TGGCTGAACT GCTCCCCAAA
GAGGAGCTGC AGGACCTGCT GGTCTACCCC AATGCCGAGG ACTCAAACAA TCCTATCATC
AGGACCGTCC CTGCAGGAAA GGCAAAGCAG ATCGTCGGTG CTCATAAAGC TGAGGCCAAG
AAGCGGGCGC AGTTCCGGAA CACGTTGATG ATGTTGCTGA TGGTCGGGAT CATCGGCTAC
TCATTCATCA CGATGCAGTG GCTGATGGGG ATCATCGCTG CAGCCTTCGT CTTCATGGCT
CTCCGGTACA GCACTCCCAA GGATGAGGCG ATGATCCCAA AGTTGCTCGT CTCCAATGAT
ACCACCGCGA CAGCTCCGTT CATCGATGCG ACCGGTTCCC AGGCCGGCGC CTTGCTCGGG
GATGTTCGGC ATGACCCGTT CCAGAGCGGC GGGCTTGAGA CCCCTGCCCA TGACCGTGTG
GAGTCTGGGG CGATCCACCG TGCTAACGGA GGTGTGCTCT TCATCGATGA GATCAATACC
CTCTCGCCGG GTTCACAACA GAACCTGCTG ACAGCACTGC AAGAGGGTGA ATTTCCCATC
ACCGGGCAAA GTGAACGCTC AAGCGGTGCG ATGGTCAGAA CCGAACCGGT CCCGTGCCGA
TTCGTGATGA TCGCAGCCGG CAACCTGGAC GCGGTCCAGG GGATGCATCC GGCCCTCCGG
TCCCGTATCA GGGGGTACGG TTACGAGGTT TTCATGTCCG AGTCGATGGA GGAGACCCCT
GAGAACCGTG AGAAGTTCAT CAGGTTCATT GCCCAGGAGA TCAAGAACGA CGGCAAGATC
CCACACTTCG ACCAGGGTGC AATGGCAGAG GTGCTCAGAG AGGGCCGCCG CCGGTCAGGG
CGCAAAGGGC ACCTGACCTT GAAACTGCGT GACATGGGTG GATTGATCCG GGTGGCCGGG
GACCTGGCCA GGCAGGATGG GGTCGAACTG ACGACCGCTG CCCACGTGCT TGCAGCCAAG
GAGACCGCTC GTTCGATCGA GGATCAGATC TCTGATGAGA ACAGCCGGCG GTTGAAGGAC
TATGATCTCT CGGTGGTGAA GGGGACAAGC ATCGGTCGGG TGAACGGGCT TGCCGTGACC
GGGGCCGACT CGGGCTCGGT GCTCCCGATC ATGGCCGAGG TCACCCTCAG CCAGAGCCAG
TTCGGCCAGG TGATCGCCAC CGGGCTGCTC AAGGAGATCG CCCAGGAGTC GATCACCAAT
GTCTCAGCGA TCATCAAGAA GTTCACCGGG CAGGACATCC AGAAGCTTGA CATCCATATC
CAGTTCATCG GCACCTACGG TGGTGTGGAC GGCGACTCGG CATCGGTTAG TGTGGCCACG
GCTGTGATCA GTGCTATCGA GGGGATCCCG GTCAGGCAGG ATCTCGCGAT GACCGGGTCG
CTCTCGGTTC GTGGGGACGT CCTTCCGATT GGGGGGGTCA CCTACAAGAT CGAGGCTGCG
GCCAAGGCAG GGATCAAGAA GGTACTGATC CCGGCCTCGA ACATGAACGA TGTGATGATC
GAGGAGCGGT ACCGCTCAAT GATCGAGATC GTTCCGGTCT ATCATATCGA GGACGTGCTG
AAGGAGGCCC TGGTCCCGGA GAACGAGGCG GGTTTCCTTT CCAAGATTAA GAACATGGCC
TCGCGGCCGG CCGCCAACCT CCTCGACAAG ACCGGAATCC GTCCAACGGT GATCTGA
|
|---|
| Protein sequence | MDSTVNEEPT HEDTILENVQ VETSSEIEVP AHLIDQVIGQ EHAVEVIRKA AIQRRHVMMI
GSPGTGKSML AKAMAELLPK EELQDLLVYP NAEDSNNPII RTVPAGKAKQ IVGAHKAEAK
KRAQFRNTLM MLLMVGIIGY SFITMQWLMG IIAAAFVFMA LRYSTPKDEA MIPKLLVSND
TTATAPFIDA TGSQAGALLG DVRHDPFQSG GLETPAHDRV ESGAIHRANG GVLFIDEINT
LSPGSQQNLL TALQEGEFPI TGQSERSSGA MVRTEPVPCR FVMIAAGNLD AVQGMHPALR
SRIRGYGYEV FMSESMEETP ENREKFIRFI AQEIKNDGKI PHFDQGAMAE VLREGRRRSG
RKGHLTLKLR DMGGLIRVAG DLARQDGVEL TTAAHVLAAK ETARSIEDQI SDENSRRLKD
YDLSVVKGTS IGRVNGLAVT GADSGSVLPI MAEVTLSQSQ FGQVIATGLL KEIAQESITN
VSAIIKKFTG QDIQKLDIHI QFIGTYGGVD GDSASVSVAT AVISAIEGIP VRQDLAMTGS
LSVRGDVLPI GGVTYKIEAA AKAGIKKVLI PASNMNDVMI EERYRSMIEI VPVYHIEDVL
KEALVPENEA GFLSKIKNMA SRPAANLLDK TGIRPTVI
|
|---|
| |