Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2688 |
Symbol | |
ID | 7272510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2818985 |
End bp | 2819878 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643571279 |
Product | HTR-like protein |
Protein accession | YP_002467675 |
Protein GI | 219853243 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.963501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGAAG ATGACAGAAC ATTAATCCAG ACACCCTGCA TACTAAAAGA AGAAAAGTCA TGGAGGTCAT CAGTGGCTGA TAACAAGCGT ATGCCCACCG GGATCACATC ATTTGATCCG GTGATGGAGG GAGGAGTACC ACCAGGGTCT GTGATCCTGC TACTCGGAGA TATCGGGGCC GGTTCCACTG AGTTCGTCTA CAGTTCAGTG ATAAATCTCT CTGTCATGAA GAAGAGCCCG AGCAACCAGC GGCAGATGCT CCCCGAAGAG ATCAGGTACA TCACGTTCAC CAAGATGGAG GAGGACATCC GGCGGGATAT CAACCTCTCC TTTGACCCTG AGATCACCGC CGGGCTGGGT GACGGTGTTC ACTTCGATGA TCTCTCTGAA CAGTACTTCG ATGCGAGCAC AGTGCCTGGC GACTGGTACA CCGAACGAGA CCTGATGACC CGTCTGAAAC GCCGTTCAGA ACACAAATCC ACCCTGGTGC AGCTGGCAAC AGTGCTGAGT ACGGTGGCAG AGAACAGTCT GGTCATCCTC GATTCGCTAA CTGATATCGC AACCAGTTAC AGTGATACCG AAAACTGGAA GGAACTGACA GCGTACCTTC GTGGTCTGCA GCGGGTCTCA AAACGCTGGA ACACGACCAT CTATATGCTA CTGACCGAAG GGATCCTGAA CCGTTCGCAG ATCCAGGAGA TCGCCGATAT CACCGATGCA GTCATCCTCT TTCGATGGGA GGAGAGCGTT GCCGCCCGGC GACAGCGGGT GATGTATTTT CAGAAGTTCC GCGGGGTGAT GCCTCACCTC GAAGAGAACG ACCTGGTGAA GTTTTCGGTC AGAATATCGC CGAAGATCGG CTTTGAAGTC TCGAATATCA GGGTGATCAT ATGA
|
Protein sequence | MTEDDRTLIQ TPCILKEEKS WRSSVADNKR MPTGITSFDP VMEGGVPPGS VILLLGDIGA GSTEFVYSSV INLSVMKKSP SNQRQMLPEE IRYITFTKME EDIRRDINLS FDPEITAGLG DGVHFDDLSE QYFDASTVPG DWYTERDLMT RLKRRSEHKS TLVQLATVLS TVAENSLVIL DSLTDIATSY SDTENWKELT AYLRGLQRVS KRWNTTIYML LTEGILNRSQ IQEIADITDA VILFRWEESV AARRQRVMYF QKFRGVMPHL EENDLVKFSV RISPKIGFEV SNIRVII
|
| |