| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2672 |
|---|
| Symbol | |
|---|
| ID | 7272494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2801585 |
|---|
| End bp | 2803678 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643571263 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002467659 |
|---|
| Protein GI | 219853227 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5427] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | [TIGR03662] Chlor_Arch_YYY domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGC TGGTCGAAGG GCTGGAGGTC CTCCTCTGGC TTGTCCTCCT CCTCCTCTTC
GCTGCCGCGC TGTACCCGCA GATGCGAAAG ATCGCCCCCA CATGGGCGGT TCCATTCTCT
CTGAACGGAG GTCTCCTCCT CTTCACCGCG ATCAGCTGGT ACTGTGGGCT GGTGCACCTT
CCTCTCCACC TGGCGCTCCT CCCATTCATC ATCCTGGTCA TCTGGCAAGC AGTGACCCGG
CAGTATTCCT GGAGATTTCG TGGAGTCGAT CTTCAGTTCC TGGTCGCCGG TGGTGCTGCC
TTTCTGTTGT TGCTGGAGTT CCGGTTTCAA ACTCCGATGA TCAGTACCAG CGAGAAGTTC
ATGGACCATG CGATCCTCGC GTCGATCATC AGGACACCGG TGGTACCGCC GCTCGACCCC
TGGTTCGCTG GCGGGTCGAT GAACATCTAT TATTATCTTG GCCATTGGAT GATGGGGGCG
CTTGGAGTGG TAACCGGCAT CCCCTCGACG GTCGTCTTCA ACCTGATCCT GCCGACGGTC
TTTGCGCTGA CGGTGATCAA CCTGCTGGCA CTGGGTCGGC TGATTGTCCC TCGTCTCCCC
TGGCTGCCGC TCCTCCTCCT CGCCCTTCCT GACCCGGAGT TCCTGATCAG GATCGTTTCT
GGGCAAGAAC TGCACCATGT CTTCTGGGAG AGTAGCCGGG TTATCTCCGG TGCGATCGAC
GAGTATCCAC TCTTCTCGTA CCTCTGGGGG GACGCCCATG CTCATGTGAT GGCCCAGTTC
AACCAGGCGT TTCTGCTGTT ATTGTTGGCG TTCTGCTGGT ACCACTGGTC CACGCTCTCC
AGCCGCTCCA AACTTCTTGT CTGCGGTCTC CTGACGCTCT CGCTCGGTTC GATGGCGCCG
ATGAACTCTT GGGACGTTCT GGTCTACGGG CCACTGACGG TGGGTGTTGG GGTGCTGCTG
GCCCTGCAGA ATGAGGAGGG GACGTTTGTG GAGAGAATTA CTCATATACT GCGGAGGGGT
ATACGTTCAC CCGGACCGCT AATCTGGCTG GCCGTTGGGG TTCCCATCGC AGCAGCCCTA
CTCTACCTCC CATTCTACCT GATGATGAAG ACAGCCGGGA CAATGGGGCT CTTCTTCATC
GGGGGAGCGG CCCACCCTCC CTCTGGGGTC GTTCAATTCC TTCTCTTCCA TGGGATCTTC
CTTGGATTGC TTTACCTGGT GCTGGCCAGG GATATCCGGG CACGCCCGTA CCTGCTGTTC
ATAGCCATTC CAGTTGCGCT CGCAGGCTAC CCGGCTGCCG CGGTGGCGCT GGTCCCGCTC
ATCTATCTGA TCACCCGCAG AACCTACGAA CCCGCTGGCA TCTTCGCGGC GACTGGACTG
CTGCTGGTTG TCCTCTGCGA GTATGTATAC TTGGAGTCGA CGTTCACCAC GACCGCTTCG
TTTCGGATGA ACACGGTCTT CAAACTCTAC TGGGCCGCCT GGCTGCTGAT CGGGGCGGGG
ACGCTCGCCC TCACCGGCAC TGCCGTTGCC TCCCGACTGT CTCATCCCCT TCTCTCCCCT
GCTCGCTGGC GGGGTGTGAT TGCGGTGGTG CTGATGATAC TGTTGATCAC ACCGCCGGTA
CTCGGGCTCG ACTTCGACAG TCATCTCTTC TATCAGCCGC ATAAAGGGGG GGCGTACACC
CTCGACGGCT CGGCGTACCT GGCCTATGAT CATCCGGCCG ATGCTGCTGC GATCGCTTTT
CTTCGGAACA GGACCGATAT ACCCTGCATC ATCGAGGCCG CAAAGAACGA ACACAGTTAC
TATTCGCGGA TCTCCTCGTT CACCGGGATC CCGACAGAGG TCGGCTGGCT CTTCAATGAA
TACCTCTGGC GAGGAAACCC CGACAACTGG TACTTCCAGC GGATGGGGGA TATACAGAAG
ATCTACGAGT CGCCAGATGA TACGGTTTCG CTGATGGACT GGTATGGGTG CCGGTACCTG
TATGTCGGGC CGCTGGAGGG GGATACCTAT AACTTGAGCC TTCCGCACAC CGGGTTGACG
CCGATCTATA CCGGAAACGG GGTGACGATC TTTTCAACAA CGGGGTCAGC GTAG
|
|---|
| Protein sequence | MALLVEGLEV LLWLVLLLLF AAALYPQMRK IAPTWAVPFS LNGGLLLFTA ISWYCGLVHL
PLHLALLPFI ILVIWQAVTR QYSWRFRGVD LQFLVAGGAA FLLLLEFRFQ TPMISTSEKF
MDHAILASII RTPVVPPLDP WFAGGSMNIY YYLGHWMMGA LGVVTGIPST VVFNLILPTV
FALTVINLLA LGRLIVPRLP WLPLLLLALP DPEFLIRIVS GQELHHVFWE SSRVISGAID
EYPLFSYLWG DAHAHVMAQF NQAFLLLLLA FCWYHWSTLS SRSKLLVCGL LTLSLGSMAP
MNSWDVLVYG PLTVGVGVLL ALQNEEGTFV ERITHILRRG IRSPGPLIWL AVGVPIAAAL
LYLPFYLMMK TAGTMGLFFI GGAAHPPSGV VQFLLFHGIF LGLLYLVLAR DIRARPYLLF
IAIPVALAGY PAAAVALVPL IYLITRRTYE PAGIFAATGL LLVVLCEYVY LESTFTTTAS
FRMNTVFKLY WAAWLLIGAG TLALTGTAVA SRLSHPLLSP ARWRGVIAVV LMILLITPPV
LGLDFDSHLF YQPHKGGAYT LDGSAYLAYD HPADAAAIAF LRNRTDIPCI IEAAKNEHSY
YSRISSFTGI PTEVGWLFNE YLWRGNPDNW YFQRMGDIQK IYESPDDTVS LMDWYGCRYL
YVGPLEGDTY NLSLPHTGLT PIYTGNGVTI FSTTGSA
|
|---|
| |