| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2588 |
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| Symbol | |
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| ID | 7270715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2711324 |
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| End bp | 2713564 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643571182 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002467581 |
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| Protein GI | 219853149 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3322] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.877964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.574702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC AATCCAAGGT CATTCTGATC GGAACCGTGA TGCTTGTCAC CACCCTGCTC
GCACTCACCC TCTTCTCCAT TATCATCCTG CGGCCCAGTT ACACCGCCCT TGAACAGGGG
GATACCATTA CCGAGATGGA CCGTGGGGTC TCCTCCCTGC AGAACGACCT TGAAGAGATG
AACAGAAATC TCGTCGACTG GGCGTTCTGG GACGACACCT ATCAGTTTGC CAGGGGAAAG
GATCTGACCT ACCCTAGTAG CAACCTGATG AAGGAGACAT TCTCCAACCT GAACCTGAAC
GGTCTGCTGA TCTATGACAG GGATGGGAAC CTGGTCTATG CACAGGGATT CAACCTGACG
ACCGACGAAT ACGCTGACCT TCCGGAAGGG CTCAACGCTT CGATCGCCAC CCACCATCAG
ACCCTCTTCT CTGGAACGGG ACATCAGTCA GTCAATGGGA CGTTGCTCCT GCCAGGCGGG
CCAGTGATGA TCGCCGCCGC CCCGATCCTG ACGAGCACCT TTCAGGGCCC TCCGGCCGGA
ACGATGATGA TGGTCCGTTC GCTCGACCAG CGCTGGCTCG CCAGAATCTG TTCGAGGTCA
GGGATCCCTG TCTCGATCCT GACCATTGAG CAGGCAGCGG CTGATCCCCG TCTTCTCAGG
ATGACTCACC CTTTGAACAG AGGGGAGCCG GTGACAGAAC CGGTGGATGA CTTGACTATC
AGGGGATATC AACTGATCAA GAGCCTGGAT GGGAACGACG GGTTCATCCT GTCAGTTGAC
AACACCCGCA CCATCACCAG GACCGGGTCA GCCACCATCG ATGGATATCT GAAGATCATC
GGACTGTTTG GAGTGCTCTT TGCCCTGTTC ACCATCTATC TGATCAGGAA GAACTTCATC
AGTCGCCTGA ACATCCTGAC CACGGGAGTT CTGTCTGCAG AGCAGGGGGA CGGCAGGCGA
AAGAGGATAG AAAAGATCAG GGGGACGATG GGCGATGACG AACTGACGGT ACTCGGGACT
GCGATCAACC GGATGCTGGA TACGATCGAC CGGGCACAGG CGGCGACTGA GGCCAGCGAA
GAGCGATACC GGAGCGTGAT CGAGGATCAG ACCGAACTGA TCTGCAGGGT CGACGTCACC
TTCACAATCA CCTTCATGAA CAGGGCCTTT GAGGACTACT TCGTTGCCGA CCAGGCAAAA
GGCCAGAAGA TCCGGACTCT CTTTCCAATG ATGCCGGAAC CGGTGAAAGA GAGGGTGGTG
CTCTTCCTAA AAGGCCTGAC CCCGGATGAA CCGGTCGGAG AGACTGAGAT CCTGTTTCAG
ATCAAGGGAG ACACGCGCTG GGCGGCCTGG ACAGTCAGAG GGCTCTTTGA TGCAACCGGA
GTGGTGACCG AGTACCAATT CGTCGGCAGG GACGTGACCG CCCAGAATCA GGCGTTCATC
GAACTGAAGG AGTACCGCGA TCATCTCGAG GAACTGGTGG ATCAACGGAG CGAGGAGATG
ATGGGGATGC AGGAGGAACT GCTGAATATC GAGCGGCTTG AGTCGATCGG GGTCCTCGCC
GGCGGAATCG CCCATGATTT CAATAACCTC CTTTCAGCCA TCCTCGGCAA CATCGAACTG
GCAAGGATGG ACCTCGATGA GGATTCGCCA CTCGATGAGC GAATGGCCGA GATGGAACAG
GTGGTCCTTC GTGCCACCGC CCTGACCCGT CAGTTGCTGA CCTTTGCCAA GGGAGGTGCT
CCGATCCGGA GATGGGTCCA CCTCGGTCCG ATGATCAAAG ACACTGCAGA ATTCACCTGC
AGGGGATCGC CGGTCAAATG CTCCTGCAGA GTCCCGGACG ATCTCTGGAT CACTGAGGTG
GATCAGAACC AGATCTCCCA GGTAATCAAC AATATCGTCC TGAATGCGGT ACAGGCGATG
CCTGACGGAG GGATACTCAG GGTAACCGCA GAGAACAGTG AGTACGACTG CGGCGAGGTG
GTACCCCTCG CCGCCGGCAG ATATGTGAAG ATCGCCCTGA CAGACGACGG CCCAGGGATC
CCTGCAGAAC AGGTCTCGCG GATCTTTGAT CCATTCTTCA CCACCAAGAC AGCTGGGAGC
GGCCTCGGTC TTTCGACCTC GTTCTCGATC ATCCGGCAGC ACAACGGGTT GCTCCTGGTG
GTCTCGACCC CGGGCGAGGG AACCACGTTC ACGATCCTGA TCCCGGCAGC AGCGAACGGT
GACGTCCCTG TAGAAGAGTG A
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| Protein sequence | MKIQSKVILI GTVMLVTTLL ALTLFSIIIL RPSYTALEQG DTITEMDRGV SSLQNDLEEM
NRNLVDWAFW DDTYQFARGK DLTYPSSNLM KETFSNLNLN GLLIYDRDGN LVYAQGFNLT
TDEYADLPEG LNASIATHHQ TLFSGTGHQS VNGTLLLPGG PVMIAAAPIL TSTFQGPPAG
TMMMVRSLDQ RWLARICSRS GIPVSILTIE QAAADPRLLR MTHPLNRGEP VTEPVDDLTI
RGYQLIKSLD GNDGFILSVD NTRTITRTGS ATIDGYLKII GLFGVLFALF TIYLIRKNFI
SRLNILTTGV LSAEQGDGRR KRIEKIRGTM GDDELTVLGT AINRMLDTID RAQAATEASE
ERYRSVIEDQ TELICRVDVT FTITFMNRAF EDYFVADQAK GQKIRTLFPM MPEPVKERVV
LFLKGLTPDE PVGETEILFQ IKGDTRWAAW TVRGLFDATG VVTEYQFVGR DVTAQNQAFI
ELKEYRDHLE ELVDQRSEEM MGMQEELLNI ERLESIGVLA GGIAHDFNNL LSAILGNIEL
ARMDLDEDSP LDERMAEMEQ VVLRATALTR QLLTFAKGGA PIRRWVHLGP MIKDTAEFTC
RGSPVKCSCR VPDDLWITEV DQNQISQVIN NIVLNAVQAM PDGGILRVTA ENSEYDCGEV
VPLAAGRYVK IALTDDGPGI PAEQVSRIFD PFFTTKTAGS GLGLSTSFSI IRQHNGLLLV
VSTPGEGTTF TILIPAAANG DVPVEE
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