Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2532 |
Symbol | |
ID | 7271701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2663074 |
End bp | 2664480 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643571127 |
Product | phosphoesterase RecJ domain protein |
Protein accession | YP_002467528 |
Protein GI | 219853096 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAGGA TGGGCTTTAA TGATGATGTA ACTGCAGCCG CAGAGCGGAT CGCTGCTGCA GAGGAGGTGA CCATCATCTC CCATATCGAT GCCGACGGGA TCACCAGCGA GGCGATCCTC GCCGAAGCGG TGCAACGAGC CGGGATCCCA GCCACCACAC ACTATATCCG GCAGCTTGAT CCCCTGACGA TCCGGACGGT GCCGGAGGAC CGGTCGCTGA AGGTCTTTGT GGATCTCGGG GCCGGGCAGC AGAACCTGCT CGAGGAGCGG GGGCTCACGG TCGACGAGGT GCTGATCGCC GACCATCACG TGGCCCAGCC GGCCACCCTC CCGTACCAGC AGGTGAACGG GGTTCCGTAC GGGCACACCC GCCTTTCGGC GGCTGGAGTG GCCTACCTGA TCGCAAAAGA GATGGACCGG AAGAACACCG ACCTTGCCTC GGTCGCGGTG GTCGGGAATG TCGGGGATAT GATGGCCCGC GAGACCCTCG GGTTGACGGG GATCGCACGG ACGATCGTCG ACGACGGGGT GGCCAACGGC TCGATCCGGG CGACGGCCAG GGATCTGAAC TGTTATGGAA CCTCGACCAG GCCGATTCAT GTCTGTCTCT CGTACAACGA CGACCCCCTC CTCCCGGGGA TCAGCAATGA TATCAACGGA TCGCTTCGCT TTCTGCAGAA GGTTGGGGTT CCGCTGAAGA CCCGGGACGG GCGATGGCGG GTCTGGGAGG AGCTTGAGCC CGATGAAAAG CGGGCGATCA CCAGTGCGCT GGTCCAGCAA CTGCTCGCCC ATGGCGAACC GGTCGACCGT CTCTTCGCCG AGACCTATGT CTTTCCGAAC GAGGCGGCCA GGACGCCCCT CCGGAACGCC TCCGAGTTCG CGACGGTGCT GAACGCCTGC GGCCGCTGGG CTCGCCCACT GGTCGGGAGT GCGATCTGCA GGGGTGATCG CGGCACTCAG TACCGTGAGG CCGAGTATAT GCTGAACAAC CACCGGACGA TCATCCGCGA GCTGCTCACG TATATCATTG AGACCGGGGT GACCGAGCTC TCCCACCTGC AGTACCTGCA TGTCGGGGAC CGGTTCCCCG ATACGATCGT CGGGATAGGG GCTGGGATGG CACTATCCAA GTTGAACTGG CGGAAGCCAA TCCTGATCAT GTGCACCCTG CCCGACGACC CGACCCTGAC GAAGGTCTCG ATGCGGACCA ACGAATGGGC GGTCAGGCAG GGTGTCGACC TGCAGGCGGT GCTGACCGCG GCATCAGCGA CGATCGGAGG GGCCGGCGGG GGCCACCCGA TCGCAGCAGG GGCATTCATC CCGCACGATG TTGAAGAGGA GTTTGTTTAT TGTGTCAACC GATTGCTCGG AGAACAGTTC GCTGTTCCGG ATCAGAACCA TCGCTGA
|
Protein sequence | MIRMGFNDDV TAAAERIAAA EEVTIISHID ADGITSEAIL AEAVQRAGIP ATTHYIRQLD PLTIRTVPED RSLKVFVDLG AGQQNLLEER GLTVDEVLIA DHHVAQPATL PYQQVNGVPY GHTRLSAAGV AYLIAKEMDR KNTDLASVAV VGNVGDMMAR ETLGLTGIAR TIVDDGVANG SIRATARDLN CYGTSTRPIH VCLSYNDDPL LPGISNDING SLRFLQKVGV PLKTRDGRWR VWEELEPDEK RAITSALVQQ LLAHGEPVDR LFAETYVFPN EAARTPLRNA SEFATVLNAC GRWARPLVGS AICRGDRGTQ YREAEYMLNN HRTIIRELLT YIIETGVTEL SHLQYLHVGD RFPDTIVGIG AGMALSKLNW RKPILIMCTL PDDPTLTKVS MRTNEWAVRQ GVDLQAVLTA ASATIGGAGG GHPIAAGAFI PHDVEEEFVY CVNRLLGEQF AVPDQNHR
|
| |