| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2516 |
|---|
| Symbol | |
|---|
| ID | 7271685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2651787 |
|---|
| End bp | 2652413 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643571111 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_002467512 |
|---|
| Protein GI | 219853080 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCGC AGTCACTGGT GGGGATCATA CTCTTCTCTT TCCTCATAGG GCTCACCGGT
GCACTGGCCC CGGGGCCGAC CCTGGTTGCG ACCATCACCG CCTCGATGAA GGGTGGGTGG
ACCGCTGGCC CGAAGGTCAC GCTCGGGCAT ATCGCCATCG AGGCGCTGGT CGCCCTGCTG
ATCCTGGCCG GGGTCGCGAC GGTGGTGCAG AGGTATACCA GTCTGATCGC GGCGGTCGGC
GGCTGCGCCC TGATCGGTTT TGGTCTGCTG ACCCTCCGCG GCGTCTCATC GGCCTCGCTG
AACCAGAGTG GGGCTGTCAC GACACAGGGA CCGATTCTTG CCGGGATGCT GACCAGCGTG
GCCAATCCGT ACTTCTGGAT ATGGTGGCTC TCGATCGGGA GCGGATTTCT GGTCGACTCG
ATCGGCATCG GAGCCCTGGC CGTGGCTGCC TTCATGGCAG GTCACTGGGC TGCAGACCTT
GGCTGGTTCA CAGCAGTCTC GACAGGGGTC CACCGGGGAG GAGAGATCCT CCCTGAACCG
GCCTACCGCA TGATCTTGCA GGGGTGTGGG GTGCTGCTGA TCCTCTTCGG TGGTTACTAC
CTATCGACCC TCCTGTCAGT CACCTGA
|
|---|
| Protein sequence | MMPQSLVGII LFSFLIGLTG ALAPGPTLVA TITASMKGGW TAGPKVTLGH IAIEALVALL
ILAGVATVVQ RYTSLIAAVG GCALIGFGLL TLRGVSSASL NQSGAVTTQG PILAGMLTSV
ANPYFWIWWL SIGSGFLVDS IGIGALAVAA FMAGHWAADL GWFTAVSTGV HRGGEILPEP
AYRMILQGCG VLLILFGGYY LSTLLSVT
|
|---|
| |