| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2456 |
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| Symbol | |
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| ID | 7271788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2590035 |
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| End bp | 2591264 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643571055 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002467456 |
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| Protein GI | 219853024 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG TATGGCCCAT AATCATAGCA GTTTTATTAT TACTCTTGGG CGGATTTGTT
GTGGCTGAAG ATCAGATGCA GACCAATCAG ACGCAGACCA TTGTCATTGG AGGGCTTCTC
CCCCTTTCAG GAAATGCTTC AGCACAGGGC CCCTCGTATA AAGCGGCAAT GGAACTGGCT
GCTGAAGACC TGAATGCAAA GTACGCAACG CTTGGACTTC CCTATCAGGT ACGTCTTCGT
ATCGCTGACA CAGGATCTGA TCCTGATGTT GCTAAAAAAC TTGGTACTGA GATGATCAGG
GATGGTATCC ATTTCATTAT CGGTCCCTTG AGTTCGGCAG AGATGACCGC TCTTGAAGAG
ACAGCGACGC AATCCCATAC CATACTCATC GGATTTGGAA GCACGGCACC GGGTCTTACC
AGCCAGAACA ATACTATTGT CCGCCTCTGC CCGGACGATA CGATTCAGGC TCAGGCACTT
CAGGGTCTCT TTAAGAAAGA GAACTATTCC ACCATCATTC CTGTCGTCAG AAATGACATA
TATGGTCAGA AATTCTATGA AATCCTGGAT AATTTATCAG AAAACGGGAC GTTCACCCTG
ACTGATCCGA TCTACTACGA ACCAGGGACA GCCTCCTTCA ACACAACTAT TGAGGAGATT
ACTCGGGATG TTCATGATGT ACCCTCACAC TCACGATCGG CAGTACTGGT TCTTGGATTT
GACGAAACTG CAGATATTCT GAATGCAGCA TCACAGAGCA GTGAACTGGG ATCTCTCTCC
TGGGTTGGGA CAGATGGTAT TGCATTATCC GATTCGGTAC TGAAGAACAG AAATGTTGCG
GCATTTGCTG CAAAAACAAA TTTCACCGCC ACCATTTATG GTGAAATGGA GAACGAGCCG
AAGTTTATGG ATTTCTCCAA GAGAATTCAG AATATCTCCG GTCTCAAGCC GACCCCGTAT
GCAGTCGTCA TTGATGATGC AGTTCAGCTC GCTGCATTGA CAGAAATGAC AGGGAAGGGG
ATCACCGATA AACGGCCGCT ATTCCTCGAC AATGCAGATC ATTTCTATGG TGTATCAGGA
TACACGTTTC TGACTGAATC CGGTGACAGG AGATATACCA ATATCGATTT CTGGAGGGTG
AAAGATAAAG GAGGAGATTA CTCCTGGACG AAGATAGGTC GGTTTGTCGA TCAGATGGCC
GGTCCCATGA TGGATATGAA GACCACATAA
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| Protein sequence | MKFVWPIIIA VLLLLLGGFV VAEDQMQTNQ TQTIVIGGLL PLSGNASAQG PSYKAAMELA
AEDLNAKYAT LGLPYQVRLR IADTGSDPDV AKKLGTEMIR DGIHFIIGPL SSAEMTALEE
TATQSHTILI GFGSTAPGLT SQNNTIVRLC PDDTIQAQAL QGLFKKENYS TIIPVVRNDI
YGQKFYEILD NLSENGTFTL TDPIYYEPGT ASFNTTIEEI TRDVHDVPSH SRSAVLVLGF
DETADILNAA SQSSELGSLS WVGTDGIALS DSVLKNRNVA AFAAKTNFTA TIYGEMENEP
KFMDFSKRIQ NISGLKPTPY AVVIDDAVQL AALTEMTGKG ITDKRPLFLD NADHFYGVSG
YTFLTESGDR RYTNIDFWRV KDKGGDYSWT KIGRFVDQMA GPMMDMKTT
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