| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2442 |
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| Symbol | |
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| ID | 7271355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2576542 |
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| End bp | 2578362 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643571042 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_002467443 |
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| Protein GI | 219853011 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCAC CCGAGGACCT GCTGAAGAGA TACTGGGGCT ACTCCTCTTT CCTCCCACAC
CAGAAGGAGA TCATCGGATC GGTGCTGAAG GGTCAGGACA CGCTCGCGAT CATGGCCACC
GGGGGTGGAA AGTCGCTCTG TTACCAGCTG CCGGCCCTCT GCCTCGGTGG CCTGACGGTG
GTCGTCTCGC CGCTGATCTC GCTGATGAAG GACCAGGTCG ACGACCTGAA CGAACGGGGG
ATCCTGGCGG TCGCCTTCAA CAGTTCGATG GAGTACCGTG TCCGGACGAA GATCGAAGCC
GACCTGAAGA ACGGAAAGAT CCGGCTCCTC TTCGTCTCTC CGGAGCGGTG TATGCAGGCC
GGCTTCCTCG ACCTGATCAA AGCCGCCCCG ATCCGGTTGA TCGCCGTCGA CGAGGCGCAC
TGCATCTCCG AGTGGGGGCA TAACTTCCGG CCGGAATACC GGCAGCTGGC TCAACTGAAG
AAACTCTTCC CGGCCGTCCC CCTCGTCGCC CTGACCGCGA CGGCCATCCC CGAGGTCCGG
CGGGACATCT GCCAGCAGCT CGGAATCTCG GACGCCCACG AGTTCGTCGG CAGCTTCAAC
CGGAAGAATC TGATGTACCG GGTCGTCGAA AAGAAGAACC CGAAGATTCT CCTCCTCACC
TTTCTGAGCC GGCACCAGCA CGAATCAGGG ATCATCTACT GCATGAGTAA GAAGGAGACC
GAGGAGGTCG CCCGCGATCT CCGGCGACGG GGGTACAATG CACAGGCCTA TCATGCTGGC
CTCTCGAAAC AGGTCAGGAC GAAGGTTCAG GACGGGTTCA TCAAGAACAC GATCACGATC
GTCTGTGCCA CCATCGCGTT CGGGATGGGG ATCGACAAGC CGGATGTCAG GTTCGTGATC
CATTACGACA TCCCAAAGAC AGTGGAGTCC TACTACCAGG AGACCGGTCG GGCAGGGCGG
GACGGCCGGC CGAGCGAGTG CGTCCTCTTC TACAGCCGGG GGGACATCGC ACGGGTCCGC
TCAATGCTCG AGCATGACCA CATGACAGAA CGAAACCTCC GGGCCTCGCT CCGGAAATTG
CAGGAGATGA CCGAGTACTG CGAGGCGATC ACCTGCCGGC GCCGGTTCCT CCTCTCCTAC
TTTGGGGAGG AGTCCCCGGA CGAGCACTGC ACCTCGTGCG ACAACTGCAA CCACCCGGCA
GCGAGGAACG ACGGCACGGA ACCGGCCCGC CTGATCGTCG AGTGTGTGAA AGAACTCTCC
TCGAACTTCG GTATCGACCT GATTACCGAC CTGTTGCGCG GGTCGACGTG CGCCAGGATC
AGAGACTATC ACCTGGACGC ACTCGCTGCA TACGGAACAG GGAAGCAGTA CAGTAAGGCT
CAGTACCGGA CCTGGATCAA CGAACTGGTC AGGCAGGGTT ACCTGGCACG GACCGGCGAC
CGGTATCTGG TGATCGGCAT GACCGACAAG GGCGAGGATC TGCTGAGGGG AAAAAACCGT
GTGATGCTGC CGGCCCAGGA GAAGATGAAG ACAAAAACCA CAAAGGCCCC GAGGGCCAGA
CCGGCCGCGG AACCTGTGGT CACCTCAGCC CGGGATACCG ACCTCTTTCT CCAGCTCAGA
GCCCTCCGCC GCTCGATCGC CGAGCAGGGA GGGATACCGC CGTTCATGGT CTTCCCCGAC
AAAACCCTCA GGGAGATGGC CCGCATCCGA CCCTGTGACC GGGAGAGTTT CCTTCAGATC
TCCGGCGTCG GCGAAGTGAA GGTGAAGCGA TACGGCCCGG CCTTCATCGA GGTGATCCGT
GGCTGTTCTG AGGAATCCTG A
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| Protein sequence | MTPPEDLLKR YWGYSSFLPH QKEIIGSVLK GQDTLAIMAT GGGKSLCYQL PALCLGGLTV
VVSPLISLMK DQVDDLNERG ILAVAFNSSM EYRVRTKIEA DLKNGKIRLL FVSPERCMQA
GFLDLIKAAP IRLIAVDEAH CISEWGHNFR PEYRQLAQLK KLFPAVPLVA LTATAIPEVR
RDICQQLGIS DAHEFVGSFN RKNLMYRVVE KKNPKILLLT FLSRHQHESG IIYCMSKKET
EEVARDLRRR GYNAQAYHAG LSKQVRTKVQ DGFIKNTITI VCATIAFGMG IDKPDVRFVI
HYDIPKTVES YYQETGRAGR DGRPSECVLF YSRGDIARVR SMLEHDHMTE RNLRASLRKL
QEMTEYCEAI TCRRRFLLSY FGEESPDEHC TSCDNCNHPA ARNDGTEPAR LIVECVKELS
SNFGIDLITD LLRGSTCARI RDYHLDALAA YGTGKQYSKA QYRTWINELV RQGYLARTGD
RYLVIGMTDK GEDLLRGKNR VMLPAQEKMK TKTTKAPRAR PAAEPVVTSA RDTDLFLQLR
ALRRSIAEQG GIPPFMVFPD KTLREMARIR PCDRESFLQI SGVGEVKVKR YGPAFIEVIR
GCSEES
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