| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2415 |
|---|
| Symbol | |
|---|
| ID | 7271328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2557665 |
|---|
| End bp | 2558039 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643571017 |
|---|
| Product | Protein of unknown function DUF1628 |
|---|
| Protein accession | YP_002467418 |
|---|
| Protein GI | 219852986 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02537] archaeal flagellin N-terminal-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.506159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATGA CACGAAATGA AGATGCAGTT TCGCCGGTCA TCGGGGTCAT CCTGATGGTC
GCGGTGACAG TGATTCTCGC AGCAGTGATC GCGGCGTTCG TATTCGGGAT GTCCGGGAAT
ATTTCAAAGG CTCATGTCGT AGCAGCAACA GGCCAGGTTG ACTCAACTGG AAATGTTGCT
GTCACCTACC AGGGAGGACA GGATGCAGCT CAAGTTCAGA GTATGAACGT AACTTTTGAT
GCAGGAAATA CCAATGTCGT CAAACCTCTT CCAATAACTG TAGGGTCATC AGTATCAGGT
ATTAAGGGCC ATACTGTCGT TGCCGCTACA TTCAAGGATG GCTCTACGTC AGTCATTCTG
GATACCACTT ACTGA
|
|---|
| Protein sequence | MKMTRNEDAV SPVIGVILMV AVTVILAAVI AAFVFGMSGN ISKAHVVAAT GQVDSTGNVA
VTYQGGQDAA QVQSMNVTFD AGNTNVVKPL PITVGSSVSG IKGHTVVAAT FKDGSTSVIL
DTTY
|
|---|
| |