Gene Mpal_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2401 
Symbol 
ID7272124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2541922 
End bp2543598 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content62% 
IMG OID643571003 
Productacetolactate synthase, large subunit, biosynthetic type 
Protein accessionYP_002467404 
Protein GI219852972 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAG GCGCTAAGGT CCTGATTGAA GGGCTGCACC GGCAGGGGGT TACTACAATC 
TTTGGCTACC CCGGGGGTTC GGTGTTACCG ATCTATGACG AACTGTATGA CTCGCCACTC
AGGCATATCC TGATGCGGCA TGAACAGGCA GCAGCGCATG CTGCGGACGG ATATGCCCGC
GCCAGCGGGA AGACCGGGGT ATGCCTGGCG ACCTCGGGAC CGGGGGCATG CAACCTGGTC
ACCGGCCTCG CGACCGCATA CATGGATTCG GTACCGCTGA TCGCCCTGAC CGGTCAGGTT
CCGACGAACC TGCTCGGTAA CGATGCGTTC CAGGAGTCTG ATATCACCGG GATCACGATG
CCGGTGACCA AGCATAACTA CCTGGTAAAA AAGGTCGCCG ACATTCCGCA GGTGCTCGCC
GATGCGTTCT ATATCGCGTC CACCGGTCGG CCCGGTCCGG TGCTGATCGA TCTCCCGAAA
GACATGATGA CCGGATCGGT GCCTGACGAT ATCGTCATCG CTCCAAAGCC GGTCCTCCGT
GGCTACCAGC CGACCCGGCA GGGTCACCCC CGACAGATCG AGAAGGCCGC CGAGCTTATC
CGGGAGGCCG AACGCCCCCT GATCTATGCG GGTGGGGGTG TGATCGCGGC CGGTGCATCG
GCAGAGCTGC TTGCCCTCTC CGAGGAACTG ATGATCCCGG TGACAACCAC GCTGATGGGT
CTCGGTGCCG TTCCGGGCGA CCACCCGCTC AACCTCGGGA TGCTCGGGAT GCACGGGACC
GAGTACGCGA ACTTCGCTGT CACCGAGGCG GACCTGTTGA TTGCCGTCGG AGTCAGGTTT
GATGATCGGG TCACCGGTAA GCTCTCGACC TTCGCGCCGG GGGCTCGGGT GATCCACATC
GATGTCGACC CGGCCGAGAT TGGGAAGAAC CGGCAACCGG AGGTGCCGAT CGTTGGCGAT
GCCAAGTGTG TGCTCGGTGA ACTCCTCTCC CGTCTGCAGA AGAAGCAGCA GTCGTCCGCC
TGGCTGGAGC AGGTTGCCGC GTGGAAGCGG GACCATCCGC TTCGGTACTG TGACGACGGG
CTCCTCCATC CGCAGTATGT GATCCAGCGA CTCTCGGCAC TGCTTGGTGG TAAGGCTGTG
ATCACCAGCG AGGTCGGGCA GAATCAGATG TGGACGGCCC AGTATTACTG CTTTCAAGAG
CCGCGGCAGT GGATCACCTC CGGCGGTCTC GGCACGATGG GTTATGGCTT CCCGGCGGCC
ATCGGTGCTC AGTATGCCCG CCCCGATGAA CAGGTCTTCG TCGTTGCCGG TGACGGGTCC
TTCCAGATGA ATATACAGGA GCTCGGTACC GTCGCGCAGT ACAACATCCC GGTAAAGATT
GTGATCCTCA ACAACCTCTA CCTCGGGATG GTCCGTCAGT GGCAGGAACT CTTCTATGAC
CGGCGGTACT CGTTCACCGA GCTGCCGGCC GTGGACTTCG TGAAGATCGC AGCAGCGTAC
GGAATCGACG GGATGCAGGT CACTACCGTC TCCGGGGTGG ATGAGGCCCT GAAGACTGCG
ATCGCCACCG ATGGGCCATT CCTCTTGGAC TTCCGGGTTG AACGGGAAGA GAATGTCTTC
CCGATGGTGC CGGCCGGTGC TGCGATCAAT GAGATGATCG GGGGGCGGGA GCGATGA
 
Protein sequence
MKTGAKVLIE GLHRQGVTTI FGYPGGSVLP IYDELYDSPL RHILMRHEQA AAHAADGYAR 
ASGKTGVCLA TSGPGACNLV TGLATAYMDS VPLIALTGQV PTNLLGNDAF QESDITGITM
PVTKHNYLVK KVADIPQVLA DAFYIASTGR PGPVLIDLPK DMMTGSVPDD IVIAPKPVLR
GYQPTRQGHP RQIEKAAELI REAERPLIYA GGGVIAAGAS AELLALSEEL MIPVTTTLMG
LGAVPGDHPL NLGMLGMHGT EYANFAVTEA DLLIAVGVRF DDRVTGKLST FAPGARVIHI
DVDPAEIGKN RQPEVPIVGD AKCVLGELLS RLQKKQQSSA WLEQVAAWKR DHPLRYCDDG
LLHPQYVIQR LSALLGGKAV ITSEVGQNQM WTAQYYCFQE PRQWITSGGL GTMGYGFPAA
IGAQYARPDE QVFVVAGDGS FQMNIQELGT VAQYNIPVKI VILNNLYLGM VRQWQELFYD
RRYSFTELPA VDFVKIAAAY GIDGMQVTTV SGVDEALKTA IATDGPFLLD FRVEREENVF
PMVPAGAAIN EMIGGRER